Gene detail

Detailed information of ANN24548-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:277353...288324
NR annotation: XP_020606848.1, N-acetyltransferase ESCO2-like [Orbicella faveolata]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN24548-RA

ATGGCAAAAGGAAGGATTTCGGCGTCTTCCAGGCAATCTACTTCGTCTGAAGCAACTATCAAGCGAGTCCGTGAATCTGAGAGGCGAAATATTATGGCACAGAAAGTCAGCGTCGTATTGACCCGAGATGATCTGCTTGCTGATATTGACTGCAACTTTAATACTAAAACCAAAGAAAAGTGTGAGAAAGATGAATATCATGACATTGAAAATAATGATGCTGTTTATCCTGGAACAGGAAGTGATCAAAAACCCAATGGTTCTGTAACATTAACTGAAGAAGGTAATGACTTAGAAAATAATGACATGGAATTGCCTTCAAATGGTTTCAGTCCAGTCAGTTTTTATGGTTCAAGAAAGCAAATCTTTACTGCGAGGATAAAGTTGTTTTCACCAAGTGCACATAAAAGATTGACAGATGAAGATGAAGTTCTCCTTCCCAATAAAGGTTCTCCTGGTGTTAAAAGGAAGAATAAAAGACAGAGCAACTCCTCTACGATGAAGAAAAAACGAAGGACTTCTAATGTTGCAAGGCAATGTAAAACCAGTGGAAACAAACAAAAACCTGCATCAATTTCCAATGAAAATTCCAGTTACATGTTTGAGAAGGAATCTCTTGTCAGCAAACCCTCTGGTGTTGATGCTGTCATTGGACACAAAGACAAAACAGATCTCTTTGCAACAACTGCAGATGACAGTTCACCGCATGAATCTGAAGGAAGTGTCGTTGGTTCGGTTTGTGACAAATCAAGCCTGATTTCAAACAAAGCTTGCTTCTCAAATCTAAGCGAGGCTGAATCTGCCTGCTCAGACGCAAGTCTCTGCAGTGGCCCTGGCTCTGTTACAGATGGTTTGTTTCTAAGGAAAAACGGCAATGAATATTTCTTTACCAATTCTACTGAGAGTAACTCACCAGTTGAACAACTTGAATCTTGTGAGATCAACAAAGACAGAACTGAGAGCATTTCAAATGGGTTGATGTTTTCTACACACCAAAGCAAGGAAAATTTGACTGTTGAAACCCCAGTTTGTGATGATTTTACCAATGAGTCGGCATCAAGTTTGTCATTTTCATTGCCATCTCCTAATACAAGTGAGAGTGATTTCACACTGAAACTCTCAGAGAGGGACACAGATTCCAGCTCCACAAAAAGTTCCCCAGAGCACCAAGTTCCTATTACCAGATATTTCAAGAGTATTACAGGACCAAAGTGTAGAACAAAGCTCACAGCTAATGGAATCTCCTCTTCTGGAATGTCATCCACAGAAAATCTTCCAGACACTAGAAACAGGGTATCTCCTAAAAGGAAAAAATCAGGGAAGAAGCAGGAACAAATGTATTTGGATCTGGGTCAAAAAGATTTTGGTCATGTGACCTGCCCCACCTGTGGTATGGTGTACACTAGAGCCCAGCCAGATGACGAAGCTGCACACATCAGGCATCACAAGAGCTTTGTCAGTGGGTTGAGATTTACTGGATGGAAGAACGAGTGTGTTTTAAAGGATTATCATAATGGCAGAGTGATAATGGTTGGACCAGACGATCATCCTCTTCACCTTAAAAAGGTAGAAGAGGTCAGAAAAGTTGTTGACAGTGAGCTGGGCTTTGTTGCTGATGTGCCATGCAGAAAATCTGAAGCTAAAACATTCCTCTTCATTTCTGCAAGAAAAGTTGTGGGATGTGCTGTGGCCGTTCAAATAGATCAGGGATATCCTGTTTTACCTTCTCCTGGTGAGTCGTCCACCCCTGAGAAACAGATCGCAGCTTGGTGTTGCAGCACGACTCCTCAGTCAGCCCAATGCGGTATCAGCCGCATTTGGGTTCACAGTCAACACAGACGGAAGAAGGTCGCCACTCGACTGCTGGATTGTGTCAGGATGAACTTCATCTACGGCTGCATCATCCCTAGGGAGCTTGTCGCATTTTCTGACCCCACACCAGACGGCAAGCGACTTGCCAAGAGTTACGCCGGCACTTCACAATTCCTTGTTTTCCGGTAG

Transcript

ANN24548-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5FWF5	N-acetyltransferase ESCO1 OS=Homo sapiens OX=9606 GN=ESCO1 PE=1 SV=3
Q69Z69	N-acetyltransferase ESCO1 OS=Mus musculus OX=10090 GN=Esco1 PE=2 SV=2
Q5SPR8	N-acetyltransferase ESCO2 OS=Danio rerio OX=7955 GN=esco2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005718 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13878 all species →	zf-C2H2_3	zinc-finger of acetyl-transferase ESCO	Domain	Interproscan
PF13880 all species →	Acetyltransf_13	ESCO1/2 acetyl-transferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028005 all species →	Domain	N-acetyltransferase ESCO, zinc-finger	Interproscan
IPR016181 all species →	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR028009 all species →	Domain	N-acetyltransferase ESCO, acetyl-transferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45884 all species →	N-ACETYLTRANSFERASE ECO	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000785 all species →	Cellular Component	chromatin	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0007064 all species →	Biological Process	mitotic sister chromatid cohesion	Interproscan
GO:0061733 all species →	Molecular Function	peptide-lysine-N-acetyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11268	ESCO, ECO1; N-acetyltransferase	EC:2.3.1.-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.