Detailed information of ANN24551-RA in Montipora grisea

Genomic Location: Scaffold_40__1_contigs__length_722149:155972...158053
NR annotation: MXY94844.1, lysine--tRNA ligase [Caldilineaceae bacterium SB0664_bin_27]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9WK04Lysine--tRNA ligase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) OX=324602 GN=lysS PE=3 SV=1
A7NFC6Lysine--tRNA ligase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=383372 GN=lysS PE=3 SV=1
A5UPG6Lysine--tRNA ligase OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=lysS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03449GreA_GreB_NTranscription elongation factor, N-terminalDomainInterproscan
PF01272GreA_GreBTranscription elongation factor, GreA/GreB, C-termDomainInterproscan
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR022691DomainTranscription elongation factor, GreA/GreB, N-terminalInterproscan
IPR044136DomainLysine-tRNA ligase, class II, N-terminalInterproscan
IPR018149DomainLysyl-tRNA synthetase, class II, C-terminalInterproscan
IPR036805Homologous_superfamilyTranscription elongation factor, GreA/GreB, N-terminal domain superfamilyInterproscan
IPR002313FamilyLysine-tRNA ligase, class IIInterproscan
IPR001437DomainTranscription elongation factor, GreA/GreB, C-terminalInterproscan
IPR028624FamilyTranscription elongation factor GreA/GreBInterproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR018151Conserved_siteTranscription elongation factor, GreA/GreB, conserved siteInterproscan
IPR006359FamilyTranscription elongation factor GreAInterproscan
IPR036953Homologous_superfamilyTranscription elongation factor GreA/GreB, C-terminal domain superfamilyInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42918LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0032784Biological Processregulation of DNA-templated transcription elongationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004824Molecular Functionlysine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006430Biological Processlysyl-tRNA aminoacylationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0070063Molecular FunctionRNA polymerase bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04567KARS, lysS; lysyl-tRNA synthetase, class IIEC:6.1.1.6
Transfer RNA biogenesisko03016deepkoala

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