Gene detail

Detailed information of ANN24570-RA in Montipora grisea

Genomic Location: Scaffold_40__1_contigs__length_722149:664078...666141
NR annotation: MYC93708.1, sulfate adenylyltransferase subunit CysN [Caldilineaceae bacterium SB0661_bin_32]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN24570-RA

ATGGACCTACTACGTTTCTCCACCGCCGGCAGCGTTGATGATGGCAAATCTACTCTGATTGGACGGCTGCTGTACGATTCTAAGGCCATCTTCGAGGATCAAATGGAAGCAGTCGAGCGGGCGAGCGCTGCACGCGGTGACCCATTGGTCGACCTGGCGCTCTTGACCGATGGACTGCGGGCGGAGCGGGAGCAGGGCATCACCATCGACGTCGCCTATCGCTACACAGCGACGCCCAAACGCAAGTTCATCATCGCCGATACACCCGGGCACATCCAGTACACCCGCAACATGGTGACCGGTGCGTCAACAGCGGAGTTGGCGATCATTCTGGTCGACGCGCGCAAAGGCGTCCTCACCCAGTCCAAACGGCACAGCTTCATCGCCTCCCTGTTACAGATTCCCCATCTTGTCGTCGCCGTCAACAAGATGGATATCGTCGGGTACAGCGAGAAGAGATACCAGGAGATCGTCGCCGACTACCGCGCTTTCGCGGCCAAGCTTAATGTGCGCGACGTCGTCTACATCCCTATCTCCGCTCTGCTCGGGGATAACATTGTGAGCCAGAGCGAGAATATGCCCTGGTACCACGGCACAACGCTGCTTCACCATCTGGAGACGGTCAACATCGGCGCCAGCCGCAACATCGTTGACTTTCGTCTGCCGATCCAATATGTGATCCGCGCCAACGCTCATTCAGATAGTGATCTGTCACAGACCACTGATTTTCGCGGTTTCGCCGGACAGATCGTCTCCGGCCGCATCACAGTCGGCGACGAAGTCGTCGCCCTGCCGACCGGTATCCGCAGCCGCGTGGCCGGCATCTACCGCGGGGAAGAGAGCTGTGAGCGGGCGAGCGTAGGCGACTCAATCGTACTTACGCTGGAGGATGAGATCGACATCAGTCGCGGCGATATGCTCGTGCGCGTGCGCAACCTGCCTCATTCATCCAATCAGATCGACGCTACACTCTGCTGGATGAGCGAAGAGCCGATGGCCCTGCCGAAGGCTTTTGCGACCCCGTCAGCTGGGCACTTGCAAAAGCCTGGGCCGTTGCCAGCTTCTTCACAGGTCACGGGTGACTGGTACTGGTTGCAGCATTCAACCCGGTGGGTGCGCGCCGCTGTCCAGGAGTTGAACTATCGCATCAACGTGGACACGATGCATAGGGAGGCCGCGCTAACTCTGCATCTCAACGAAATTGGCCGCGCACAGATCGTTACGACGGAGCCGCTCTTCTTCGATTCCTATCAGATCAACCGCGCCACGGGTAGCTTCATTCTCATCGACCCGCATACGAACAACACGGTCGCAGCCGGCATGATCCGGGACCGGGCGCGGCGGGTGAGCGAACTGGTGCAAAAGCGAGGAGAGAGACCCGCGGCAATCACTAGCGCCTCCCGCTCCTCAGACGTCGTCTGGGAGCCGCTAGCGGTCACGCGGCCAATGCGGGAGGAGTTGAACGGGCACGAGGCGGCGGTTCTGTGGTTCACCGGTCTGTCCGGTTCAGGCAAATCGACGGTTGCCAAGGCGCTGGAACAGCGGCTGTACCGGCTGGGCGTACGCACTTTCTCGCTGGACGGAGACAACGTTCGCCATGGCCTGAACAGTGACTTGGGATTCTCCGCTGAGGCGCGTACCGAGAATATCCGCCGAGTTGCTGAGGTGGCTAAACTGGCGTTCGAGCACGGCAATATCGTGCTATGCACATTTATTTCCCCCTATGTGGTTGATCGGGAAGCGGCGCGGGCGCTGATTTTGGGCGGCGACCGGGGAGAAGCTTCGCCAGGAGCTGGCCTTGGCCGGTCGGCGTCCGACCAGGAGGCCAGGTTCTGGGAGGTCTACGTTAAATGTGACCTGGAGGTCTGTAAGCAGCGGGATCCCAAGGGGCTGTACGCCCGCGCCGCGCGCGGTGACATTGCGAACTTCACAGGTGTTTCGGCCCCCTACGAAGAGCCGTCTCGGCCGGACCTGGTGCTAGAGACCGATCGGTACGCGGCTGACGAACTGGCGCAGCGGATCCTGGAGGAGTTGGCGCGGGCGGGGATTCTTTCGGATGTCTAG

Transcript

ANN24570-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P9WNM4	Bifunctional enzyme CysN/CysC OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=cysNC PE=3 SV=1
P9WNM5	Bifunctional enzyme CysN/CysC OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=cysNC PE=1 SV=1
P13442	Bifunctional enzyme NodQ OS=Rhizobium meliloti (strain 1021) OX=266834 GN=nodQ PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003228 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01583 all species →	APS_kinase	Adenylylsulphate kinase	Domain	Interproscan
PF00009 all species →	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031157 all species →	Conserved_site	Tr-type G domain, conserved site	Interproscan
IPR044139 all species →	Domain	Sulfate adenylyltransferase subunit CysN, Domain III	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002891 all species →	Family	Adenylyl-sulfate kinase	Interproscan
IPR050100 all species →	Family	Translation factor GTPase superfamily members	Interproscan
IPR000795 all species →	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR009001 all species →	Homologous_superfamily	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Interproscan
IPR041757 all species →	Domain	Sulfate adenylyltransferase subunit CysN, GTP-binding domain	Interproscan
IPR044138 all species →	Domain	Sulfate adenylyltransferase subunit CysN, Domain II	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR011779 all species →	Family	Sulphate adenylyltransferase, large subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23115 all species →	TRANSLATION FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000103 all species →	Biological Process	sulfate assimilation	Interproscan
GO:0004020 all species →	Molecular Function	adenylylsulfate kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006790 all species →	Biological Process	sulfur compound metabolic process	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00955	cysNC; bifunctional enzyme CysN/CysC	EC:2.7.7.4 EC:2.7.1.25	Monobactam biosynthesis	ko00261	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.