Detailed information of ANN24632-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:1815546...1825632
NR annotation: XP_020613534.1, xylose isomerase-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q40082Xylose isomerase OS=Hordeum vulgare OX=4513 GN=XYLA PE=1 SV=1
Q9FKK7Xylose isomerase OS=Arabidopsis thaliana OX=3702 GN=XYLA PE=2 SV=2
Q7UVG2Xylose isomerase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) OX=243090 GN=xylA PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010532 (this species only)

 Pfam domain
No Pfam domain signature was detected for ANN24632-RA. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR001998
all species →		FamilyXylose isomeraseInterproscan
IPR036237
all species →		Homologous_superfamilyXylose isomerase-like superfamilyInterproscan
IPR013452
all species →		FamilyXylose isomerase, bacterial-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48320
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0009045
all species →		Molecular Functionxylose isomerase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01805xylA; xylose isomeraseEC:5.3.1.5
Fructose and mannose metabolismko00051deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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