Gene detail

Detailed information of ANN24648-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:2034974...2045143
NR annotation: CAH3187265.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P09057	Ornithine decarboxylase OS=Rattus norvegicus OX=10116 GN=Odc1 PE=1 SV=1
P27119	Ornithine decarboxylase OS=Mus pahari OX=10093 GN=Odc1 PE=2 SV=1
P27117	Ornithine decarboxylase OS=Bos taurus OX=9913 GN=ODC1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02784	Orn_Arg_deC_N	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	Domain	Interproscan
PF00278	Orn_DAP_Arg_deC	Pyridoxal-dependent decarboxylase, C-terminal sheet domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000183	Family	Ornithine/DAP/Arg decarboxylase	Interproscan
IPR002433	Family	Ornithine decarboxylase	Interproscan
IPR029066	Homologous_superfamily	PLP-binding barrel	Interproscan
IPR022644	Domain	Orn/DAP/Arg decarboxylase 2, N-terminal	Interproscan
IPR022653	Binding_site	Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site	Interproscan
IPR009006	Homologous_superfamily	Alanine racemase/group IV decarboxylase, C-terminal	Interproscan
IPR022643	Domain	Orn/DAP/Arg decarboxylase 2, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11482	ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004586	Molecular Function	ornithine decarboxylase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006596	Biological Process	polyamine biosynthetic process	Interproscan
GO:0033387	Biological Process	putrescine biosynthetic process from ornithine	Interproscan