Gene detail

Detailed information of ANN24662-RA in Montipora grisea

Genomic Location: Scaffold_67__1_contigs__length_379612:24074...25069
NR annotation: GIX47275.1, MAG: threonine aldolase [Candidatus Tectomicrobia bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O07051	L-allo-threonine aldolase OS=Aeromonas jandaei OX=650 GN=ltaA PE=1 SV=1
P75823	Low specificity L-threonine aldolase OS=Escherichia coli (strain K12) OX=83333 GN=ltaE PE=1 SV=1
P58319	Low specificity L-threonine aldolase OS=Escherichia coli O157:H7 OX=83334 GN=ltaE PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003569 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01212 all species →	Beta_elim_lyase	Beta-eliminating lyase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001597 all species →	Domain	Aromatic amino acid beta-eliminating lyase/threonine aldolase	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR023603 all species →	Family	Low specificity L-threonine aldolase-like	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48097 all species →	L-THREONINE ALDOLASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006520 all species →	Biological Process	amino acid metabolic process	Interproscan
GO:0016829 all species →	Molecular Function	lyase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006545 all species →	Biological Process	glycine biosynthetic process	Interproscan
GO:0006567 all species →	Biological Process	threonine catabolic process	Interproscan
GO:0008732 all species →	Molecular Function	L-allo-threonine aldolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01620	ltaE; threonine aldolase	EC:4.1.2.48	Glycine, serine and threonine metabolism	ko00260	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.