Gene detail

Detailed information of ANN24677-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:2479405...2486569
NR annotation: XP_029185420.2, mitochondrial chaperone BCS1-like [Acropora millepora]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7ZTL7	Mitochondrial chaperone BCS1 OS=Xenopus laevis OX=8355 GN=bcs1l PE=2 SV=1
Q5E9H5	Mitochondrial chaperone BCS1 OS=Bos taurus OX=9913 GN=BCS1L PE=2 SV=1
Q9Y276	Mitochondrial chaperone BCS1 OS=Homo sapiens OX=9606 GN=BCS1L PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007895 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08740 all species →	BCS1_N	BCS1 N terminal	Domain	Interproscan
PF00004 all species →	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014851 all species →	Domain	BCS1, N-terminal	Interproscan
IPR050747 all species →	Family	Mitochondrial chaperone BCS1 subfamily	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR003959 all species →	Domain	ATPase, AAA-type, core	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003960 all species →	Conserved_site	ATPase, AAA-type, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23070 all species →	BCS1 AAA-TYPE ATPASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0032979 all species →	Biological Process	protein insertion into mitochondrial inner membrane from matrix	Interproscan
GO:0034551 all species →	Biological Process	mitochondrial respiratory chain complex III assembly	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN24677-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.