Detailed information of ANN24708-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:3333591...3377495
NR annotation: XP_044166009.1, LOW QUALITY PROTEIN: uncharacterized protein K02A2.6-like [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000182 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01498
all species →		HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF02796
all species →		HTH_7Helix-turn-helix domain of resolvaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR002492
all species →		DomainTransposase, Tc1-likeInterproscan
IPR006120
all species →		DomainResolvase, HTH domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for ANN24708-RA. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006313
all species →		Biological ProcessDNA transpositionInterproscan
GO:0015074
all species →		Biological ProcessDNA integrationInterproscan
GO:0000150
all species →		Molecular FunctionDNA strand exchange activityInterproscan
GO:0006310
all species →		Biological ProcessDNA recombinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN24708-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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