Detailed information of ANN24743-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:3938775...3951731
NR annotation: XP_044168798.1, E3 ubiquitin-protein ligase BRE1B-like [Acropora millepora]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9VRP9E3 ubiquitin-protein ligase Bre1 OS=Drosophila melanogaster OX=7227 GN=Bre1 PE=1 SV=2
Q5DTM8E3 ubiquitin-protein ligase BRE1A OS=Mus musculus OX=10090 GN=Rnf20 PE=1 SV=2
O75150E3 ubiquitin-protein ligase BRE1B OS=Homo sapiens OX=9606 GN=RNF40 PE=1 SV=5
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005469 (this species only)

 Pfam domain
No Pfam domain signature was detected for ANN24743-RA. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR013956
all species →		FamilyE3 ubiquitin ligase Bre1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23163
all species →		RING FINGER PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0033503
all species →		Cellular ComponentHULC complexInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071894
all species →		Biological Processobsolete histone H2B conserved C-terminal lysine ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN24743-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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