Gene detail

Detailed information of ANN24752-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:4159124...4193418
NR annotation: AIY62327.1, piwi [Fimbriaphyllia ancora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN24752-RA

ATGACGGGGCGAGCCAGGGGAAGAAGCCGAGGGCGAGGGCGAGGTGGAGGTGGTGGTGATGCAGCTCGCAGGCCCGGGGAAGCAGCTCAAGCACCAGTGCCTGAGCAGGCCCCTGTAGGGCGAGGAAGAGCTAGAGGGCCCCCTCCTGCACAAGCTCCGGCTTCAGTTCCCCAAAAAGCACCACCTGCTCAAGTTGCACCCCCTACGCAGGCAATGGCAGATATGAGTGTGAGCCAGGAACAGAGACCACCAAGGAGATCAAGGGACAACCCAGATGATGTAGCAACCAAACCAGCCCACATTGCTGACAAGAAGGGAATGACTGGCGACAGAGTTTCACTTGTCACAAATCATTTCAAGCTGAAAACAAAACCAAATTTTGGCGTTTACCAGTACAATGTCAGTTATAACCCAGAGCAAGAGTCCAAGAGGGTCCGAGTTGGTCTCCTGAGAAGCCAGAGTGATGTTATTGGACAAGTTCACGCATTTGATGGCATGATGCTTTATCTTCCAATTCGGCTGCCTGAAAAGTCAACTGTACTTAACCTTACCAAGTTGAACGGGGACCCTGTTGTAATGACTATCACGCATACAAATGATGTCGCCAAAGACTCGCCAAGTATGCTGCAGTTGTTCAACATAATCTTCCGAAGAATCCTCAAGAACATTGGCATGCAACAGGTTGGCAGGAACTATTACCACGTTTCACGTCCTATCATGATTGACAAATTCAAGTTGGAATTGTGGCCTGGCTATACCACGTCAATCTTGCCTTATGAAACTGATGTCCTCCTGTCGGCAGATGTGTCCCACAAAGTTTTAAGGCAGACAACTGTCTTGGAATACCTCTATGATTTGTATGGAAATACAAAGAGCGATTTCCACAACGTAGCTTGCAAGAAACTTGTTGGTCAAATCGTTTTGACACGTTACAACAACAAGACATACCGCATTGATGACATCAAATGGGACAAGTATCCAACTCACACCTTCCATGGACGATTCAAAGGAGAGGAGAAAGACATTACATATGTTCAATATTATGAAGAGGTTTACAACAAAACCATTACCGATAGTGATCAGCCTCTTCTGGTCAGCCGCCTGAAAAAGATTCCGGGCCAGAAAACAAGGATCCCAGAAGGAGAAGTATTCCTTGTCCCAGAGTTGTGTTTCTTGACAGGTCTTACTGATGAGATGCGCAATGACTTTTCTCTCATGAAGGATCTTGCTATTCACACCAGAGTTGACCCAAAGACACGTAATAAGTCTCTCCTGACGTTTATGGGTGACATATGCAGTAATCAAGACTCAAGCAGAGAATTATCTGGCTGGAATCTGGAGTTTGAGAAGGAAACCCTTTCCTTACAAGGAAGAGTTCTACCAACAGAGAAGATTTACCAGAAGGGCAAAACGTACAGCTATGATAAAAAGACTGCTGATTGGTCCCGAGAGATGAGAGGCAATCCCCTGCACAGCACAGTCGATCTCAGCCAGTGGGCTCTTATATATTCACAAAGAGACAGTGCAAATGCCAAGGACTTTGAACAGACTTTGGGCAAAGTTTGTGGCCCCATGGGAATCAGAGTTTCAAATTCTCAAGATGTTCGGCTCCCTGATGACCGCACAGAAAGCTATTTAAAGGCCATTAAACAGGAGTACAGTGATAACTTGCAAATGGTTGTTACCATTTTAACAACAAATCGTAAGGACCGTTATGATGCCATCAAGAAGCTTTGTTGCTTGGAGAAGCCAGTGCCCTCTCAGGTGATTGTGGGACGCACCATCAGTAAGAAACAGATGATGATGAGTGTCTGTACTAAAATTGCAATTCAACTTAATTGTAAACTTGGTGGTGAAGCCTGGGCAGTTGAGATACCACTGAAAAAAACAATGGTTATTGGCATTGACTGCTATCATGACTCATCAACTAAAGGTCGCTCGGTTGGAGGCTTTGTAGCCAGCGTAAATCAGACACTTACAAAGTACTACTCAAAAGTCAGCTTTCAGCACACAGGACAAGAGCTTATAGATCAATTGAAGCTTAACATGACAGCTGCTTTGAGGCACTACAATGAGGTGAATGGCGATTTGCCTGAAAGAATCCTGGTCTACCGTGATGGTGTTGGTGATGGACAATTGGCAGCTGTTGTAGAACATGAAGTACCACAGCTTAAATCATCTTTTGTTGAGGTTGAAAGAGACTATAAGCCCAAATTTGCTGTTATCATTGTAAAGAAGCGGATAAGTGCAAGACTTTTCCACAGAGGAAATGATGGCAATCTTGCCAACCCTCCTCCAGGCACTGTTGTTGATACAGCAATCACACGGCCGCAATGGTTTGATTTCTTTCTTGTGAGCCAATCTGTGCGTCAGGGAACAGTGTCTCCCACTCACTACAACGTGATTGAGGACAGCTCTGGTCTCACTCCTGATCACTTCCAGCGCTTGACGTACAAACTCACACACTTGTACTACAACTGGCCGGGGACCGTCCGTGTACCAGCACCATGCCAGTATGCCCACAAACTGGCATTCCTTGTTGGCCAGTCACTCCACCAGAAACCTAGCCCTGAGCTTGAAGACAAGCTGTTCTTCCTTTAA

Transcript

ANN24752-RA

Protein

Uniprot

Uniprot term	Description
Q9JMB7	Piwi-like protein 1 OS=Mus musculus OX=10090 GN=Piwil1 PE=1 SV=1
Q96J94	Piwi-like protein 1 OS=Homo sapiens OX=9606 GN=PIWIL1 PE=1 SV=1
Q8UVX0	Piwi-like protein 1 OS=Danio rerio OX=7955 GN=piwil1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02171	Piwi	Piwi domain	Family	Interproscan
PF02170	PAZ	PAZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR003165	Domain	Piwi domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR003100	Domain	PAZ domain	Interproscan
IPR036085	Homologous_superfamily	PAZ domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22891	EUKARYOTIC TRANSLATION INITIATION FACTOR 2C	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004521	Molecular Function	RNA endonuclease activity	Interproscan
GO:0031047	Biological Process	regulatory ncRNA-mediated gene silencing	Interproscan
GO:0034584	Molecular Function	piRNA binding	Interproscan
GO:0043186	Cellular Component	P granule	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02156	AUB, PIWI; aubergine	-	Chromosome and associated proteins	ko03036	deepkoala