Gene detail

Detailed information of ANN24772-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:4495593...4509915
NR annotation: CAH3013750.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4IF93	TBCC domain-containing protein 1 OS=Bos taurus OX=9913 GN=TBCCD1 PE=2 SV=1
Q9NVR7	TBCC domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TBCCD1 PE=1 SV=1
Q5FVR8	TBCC domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Tbccd1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007104 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07986 all species →	TBCC	Tubulin binding cofactor C	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016098 all species →	Homologous_superfamily	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	Interproscan
IPR017901 all species →	Domain	C-CAP/cofactor C-like domain	Interproscan
IPR039589 all species →	Family	TBCC domain-containing protein 1	Interproscan
IPR006599 all species →	Domain	CARP motif	Interproscan
IPR012945 all species →	Domain	Tubulin binding cofactor C-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16052 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0031616 all species →	Cellular Component	spindle pole centrosome	Interproscan
GO:0051661 all species →	Biological Process	maintenance of centrosome location	Interproscan
GO:0051684 all species →	Biological Process	maintenance of Golgi location	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16810	TBCCD1; TBCC domain-containing protein 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.