Detailed information of ANN24947-RA in Nanomia septata

Genomic Location: chr6:136645735...136658646
NR annotation: XP_002156786.1, eukaryotic translation initiation factor 3 subunit L [Hydra vulgaris]
Species Nanomia septata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7SDW5Eukaryotic translation initiation factor 3 subunit L OS=Nematostella vectensis OX=45351 GN=v1g169424 PE=3 SV=1
Q7T2A5Eukaryotic translation initiation factor 3 subunit L OS=Danio rerio OX=7955 GN=eif3l PE=2 SV=1
Q5F428Eukaryotic translation initiation factor 3 subunit L OS=Gallus gallus OX=9031 GN=EIF3L PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005683 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10255
all species →		Paf67RNA polymerase I-associated factor PAF67RepeatInterproscan
PF04969
all species →		CSCS domainDomainInterproscan
PF21787
all species →		TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008978
all species →		Homologous_superfamilyHSP20-like chaperoneInterproscan
IPR019382
all species →		FamilyTranslation initiation factor 3 complex subunit LInterproscan
IPR006612
all species →		DomainTHAP-type zinc fingerInterproscan
IPR007052
all species →		DomainCS domainInterproscan
IPR000717
all species →		DomainProteasome component (PCI) domainInterproscan
IPR048365
all species →		DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13242
all species →		EUKARYOTIC TRANSLATION INITIATION FACTOR 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003743
all species →		Molecular Functiontranslation initiation factor activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005852
all species →		Cellular Componenteukaryotic translation initiation factor 3 complexInterproscan
GO:0006413
all species →		Biological Processtranslational initiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN24947-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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