Gene detail

Detailed information of ANN24970-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:8600326...8603202
NR annotation: XP_020630672.1, uncharacterized protein LOC110067658 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN24970-RA

ATGGCATCTTCATCATCATCTTGTGGCGCAATCGGGTCCTTCGCTTCTGACGCGTCCGAAGAAAAAACGAATGGCACAAGATTTGCTCGGTTAATGATCGATGAAGGAACAAACGTTCTAAAAAGGTTTCTTCTTTCCTGCATTTCTCCTCCCAAAACACTGGGGGACGTGCTGCAGACGAACCTTCCAAAGCTGGAGAATTTAAAGAAGAAACGTGTGATTTTCGATGATCAGTGGGAAAAGTTATTTCCTCCTTCGGGTGACCCACCAGACGCAGAAATATTTGACATTACGCTGTTGCATTTGTTGATCCGAGAACTTTGCAATTTACCGCCGCCTATGGCAGGATGGCACAAGATGCCTGCCGAGGACGACGAAGGTTTACAAGCAAACATCACCAGAATCAAGTGCTTTAGAAACGAGCTGTGCCACAGTCATTCCACCGGCATTCCTAATAGCGAATTCGAGGACAAGTGGAACAAAATATCTTCATCTTTAGAAGCAATCGAGGTTGACGTCTACCGAAAGAAACTTCAAAGCCTCAAGAACGATCCTATCGATCACGATACTCGTCGAGCAGTCGAGGAACAAGTCGAACAGTGGCGGATATCTCAACAACAGGATGAGGATGAGCTCAACGGTGAGCTTTGCAGCTATCTTCCAAACAAACTACCAGACGAAGGTATAATCGGTCGTTCTAAAGAGTTAATGCAAGTTGAAGAATTCCTCCAAAGCGAAGCCCTCTCCGTTGTGCTGATAACCGGGGGACCAGGATTTGGAAAAACAACTGTGGCAAAAGCCGTGGCTCACGAGCAAGCGAAACCAGAAAACCGGAAAACTGTAATATTTTGCAGTCTTGTATCAAAGGAAACGTTTACCGAAGTAGCCACTGAGATGATCCACTCGTGTGGCAAAATCCCGAAAGCGCAATTGTCAGAGAAACCGGATCAGTGGCTCAAAGAATTGTGCAAACAGATCCAAAGGCAAGTCACATTTGTGCTTGACAACGCAGATGGTATCCTTGAGTCGCAAGATCGTGATTCCTTCATAAGACTACTCTGTACGATGAGAAGCCTATCGAAGCAGAAGGTGGCGTTTGTGATTACTTCCAGAAAAACATTTCAAGATCCGGATCTGCCATCAAAAGATGTAAGGCTTGATCCGTTGTCACCCGAAGAGGCGAAGAAAATACTCATCTCTCGCGTCGATGATGAAGAGATCAGAAAGAAGCTTTGCAAGACAGAGAAGATAGTTGATCTATGCGGTTGTGTCCCTTTGGCTCTTTGCATCGTTGGGTCTCTCCTTTCAGACTACACCGAAGAGAAGCTCATTGAACACCTTAAACAGAAACCCATGACCATTCTGCAAGACGATGGTAAATCCGTCCAAATGGCGATCAAGACGTCTTTTGACCTTTTGACTAAAGCTGAACGAGACGCGTTGGTTGTTATGTCCGTGTTTCCGGGATCATTTGACGGTGATGCTGCGGACGCCGTGATAACATCATGTTTGGACTCCGGAACTTTACCTATTTCGACCTTACGTTCTTTGAAGAACAGATCACTGGTTGAACAGACACATTTCCGTAGATATCAGTTGCATCCACTTATCCGTGCTTTTGCAAAGAAGATTGGACAAAGTAAAGATTCTCAACTTTTAGTTAAAGGAGAAAAACTGGCCTGTGTACACTTTATGTTCCGTCTTGATGAAAATGCTGAGAGGTTCTGGGGCAAAGACACCTGCAAAGCAGCTATCGATTCTTTCAGTGAGGACAGACACAACTTCGAGCATTTCCTTCAAGTGTACTCTGAAAGAATGGAAGACCAAGACCAGATGATCGTCGACACTTGCCAAAAGATCCTTGAAGATCTTCCCCAAAAGTGTATGTACATAGAAAAGTGCGTCCACCCGCAGTTTTATATTCAGTTCTTGGAGAGGCTGTTAAAGTCTTTTAAACCAGTAATCGAGCCAGTGCACGAAGTGGAACTGTTGTGCCTACTTGGGCATGAAATGAGAAAAAAAGGTGAAAAAGAAAAGTACAACGATTACATGGAGAAGGCCAGTCATATCTATTCAGAGAATGATACTAAATTTGAGACAAACGCTCTGTCGCAAGTGGTCTACCTCCATAGTCAAGCCCGTTTTATCTCAGAGGCAAAGGTATTTCGGGATCAAAGACCAAAAAAGTTGTACCACACCGCACTGAAAATCTGCGAGAAGAAACTTCCTGACCATCCCGAAACTGCAGCAACCTTGTTATTTGCTGGTAGAAATGCGAAACGCCGGAAGGAAAACGACGAGGCGAGCGCAAACTTCAAGCAAGCTCTTAACCTCTTTAAGGAACGCCTTGGTGATCATTTTATGACTGCTCAGTGCCTTAAAGACATTGCGGACTTCATTTGGTTTGCTGAGAAGAAAGATGACAGGTTGGATAAATCTCTAGAGTGTTACAAAACGGCAATGGAAATGATGGAAAAACTGGGAATGAATGATCAAAAGGAAAGCATCCTTACTCTAAAAAACTATGGCGTTTGTCAGATGCAAAAAGGTAACCTTACAGAAGCAAAGAAGTTGCTTAAAAAAGCAGAACTCGTTGCTGAGAGAGAGCTAGACAAAGATCATAGGTGGAAAGTCATGGTGTATACCGAACAGGCTTTTTTGTACCATAAAGAGGTAAATGAACAGGATCTGGAAGCATCGATTAAAGAAGAACTACTGGACCAAATGGAAGCATCGCTTAAGGAAGGACTAGATATGTGTTTCAGACTTAATGACGGCAATCGAGACATTGAGCGCTTAGGCAACAAACATTTCATCCGAGAAGTTCTAAATCGTTATCCAGAAAGGTTTCCAGAGAAGCAGTACCCTCGTCAGTGA

Transcript

ANN24970-RA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00931	NB-ARC	NB-ARC domain	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR002182	Domain	NB-ARC	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR042197	Homologous_superfamily	Apoptotic protease-activating factors, helical domain	Interproscan
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0043531	Molecular Function	ADP binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan