Detailed information of ANN25020-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:9482049...9492162
NR annotation: XP_022793103.1, RING finger protein 215-like [Stylophora pistillata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SPX3RING finger protein 215 OS=Mus musculus OX=10090 GN=Rnf215 PE=2 SV=1
Q9Y6U7RING finger protein 215 OS=Homo sapiens OX=9606 GN=RNF215 PE=4 SV=2
Q9D304E3 ubiquitin-protein ligase RNF128 OS=Mus musculus OX=10090 GN=Rnf128 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010485 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639
all species →
zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR051073
all species →
FamilyZNRF3/Arkadia E3 ubiquitin-protein ligasesInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16200
all species →
RING ZINC FINGERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006511
all species →
Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN25020-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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