Detailed information of ANN25022-RA in Montipora grisea

Genomic Location: Scaffold_45__1_contigs__length_568182:272579...273583
NR annotation: RKU12582.1, excinuclease ABC subunit C [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2RLU8UvrABC system protein C OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=uvrC PE=3 SV=1
Q2NGT2UvrABC system protein C OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) OX=339860 GN=uvrC PE=3 SV=1
Q67T37UvrABC system protein C OS=Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T) OX=292459 GN=uvrC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0015663 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12826
all species →		HHH_2Helix-hairpin-helix motifMotifInterproscan
PF08459
all species →		UvrC_RNaseH_domUvrC RNAse H endonuclease domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004791
all species →		FamilyUvrABC system, subunit CInterproscan
IPR010994
all species →		Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR050066
all species →		FamilyUvrABC system protein CInterproscan
IPR041663
all species →		DomainDisA/LigA, helix-hairpin-helix motifInterproscan
IPR001162
all species →		DomainUvrC, RNAse H endonuclease domainInterproscan
IPR038476
all species →		Homologous_superfamilyUvrC, RNAse H endonuclease domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30562
all species →		UVRC/OXIDOREDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0009380
all species →		Cellular Componentexcinuclease repair complexInterproscan
GO:0009381
all species →		Molecular Functionexcinuclease ABC activityInterproscan
GO:0006974
all species →		Biological ProcessDNA damage responseInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN25022-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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