Gene detail

Detailed information of ANN25072-RA in Montipora grisea

Genomic Location: Scaffold_57__1_contigs__length_433456:172074...174364
NR annotation: RKU34562.1, CTP synthase [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN25072-RA

ATGGTACAACATGTCTATGAAAGCGCGTGCCGGGCAAAAACCCTAAATGAAGTTATTGTTGCAACGGACGACCGGCGCATCTATGATGCCGTTAAGCAATTCGGTGGGAACGTCCAGATGACCGGCGAGTGCGCGACCGGAACCGCGCGCGTGGCTGTCGTGGCTGAACAGTTGACATGTGATATTATTGCCAACATTCAAGGGGACGAACCGTTGCTTGAACCTGCACAGATAGACATGATGATTCAGCCTTTCCTCGACAGCCCGGCGGTGCAAGTTTGCACATTAAAACAGCGGGTTGACACTGTTACAGATTACCGGGATGTGAACGTCGTTAAAGTTGTTACAAATCTTGAGGGCGATGCGTTATATTTTTCGCGAGCATCTATGCCCGGTAAAGTGCCTGAGGCCGCCCTACAAAAATTTCCGGTGTATCGACATGTGGGATTATACGCTTACCGACGGGAACAACTTCTCGCCTTCACAAGGTGGGAATGCACCCCTTATGAAATTGCGGAGGGCTTAGAACAGTTGCGTTTTTTGGAACACGGTGTCCCCATCCATGTTGTCGAAACCGATACCCCACTGATTGGTGTTGATGTTCCAGGCGACTTGGAGCGGGTGAAACGGATTTTAGAAGGAAGAGGCGGCGTTATCTCAGGTATCGGCAAGGGGATTACGACAGCATCGTTAGGGCGGTTGCTCATCAACCGCGGCTTTAAAGTGAGTGTTGTCAAAATAGATCCGTATCTCAATGTTGATGCCGGCGTGATGAATCCGTTCCAACATGGCGAAGTTTTCGTAACCCATGATGGGGCTGAAACCGACTTGGACGTGGGAAACTATGAAAGGTTTCTGGGACTTGATCTGAATCGGCACGCTAACTTTACGACAGGTTCCGTCTATAGCGAAGTGATTAAGAAAGAACGACGAGGCGATTACCTCGGAGAAACGGTGCAGCTCATCCCACATATTACGGATGAAATCAAACGCCGCATCTACCAGATTGGGAAGGATACCGATGCTGACATCGTTATCACAGAAATCGGCGGCACTATCGGCGATTTTGAAACGCCTCCGTTTGTCGAAGCTATCCGACAAATGGCAGTTGAGGTTGGCCGAGAAAATACAATGTTCCTCCACGTCTCGCTGATTTACACCCTACCGAATGGCGAAAGCAAGAGCAAACCCACACAACATAGCATACGGAAACTCCAAGAGTTGGGCATTCAGCCAGAGCTGTTGCTTTGCCGCACCAGCCAACCGCTTGATGAAAGTGTACGTATGAAGATCGCGCTTCTTTGCGGCATCAGTTCGGCGTACATTCTTGAAGGCTTAGACACCAAATGCGTTGATGAAATCCCACTCAATTTTGAACAACAGGGCATGGGGCAGCTCGTCTCAAAAAAACTCGGGCTTGAAAGACGCGCAACGATGGATACCGAATGGATAGCCATGGTTGAAAAACTGAAAAACCCGAAACACCACACCCGAATCGCGATTGTTGGAAAATATACAACAGGCAGCGATGCCTATATCAGCGTACAGGAAGCCGTGAAACATGGTGGAATTGCCAACGAGGCTGCAGTTAACATTGAGTGGATAGAAGCTGAATCGCTCACAAACCATCCGAACCTTGACAGTGTCTTTGAGAATGTTGATGGAATACTGGTCCCAGGGGGCTTCGGCTATCGTGGAATTGAAGGGATGTTGGTTGCTGCACGATACGCCCGCGAAAACCGAATTCCGTATTTGGGACTATGCCTCGGCATGCAGTGTATGGTAATTGAGTTTGCCCGGAACGTAGCAAACCTAAAAAATGCAAACAGCACAGAGGTAGATGCAGAGACACCTCACCCCGTTATAGACTTGATGCCAGAGCAACGCGCCATCGCTGACCTTGGAGCTACGATGCGGCTCGGGATTTATCCATGTGTCCTCAAAGAAAATACCAAAAGTTACGCCGCCTATCAGCAGCCTATTATTGTGGAGCGGCACCGGCATCGCTATGAGTTGAATAACCACTACCGCTCGCAATTGGAAACGGCAGGACTCTGTTTTAGCGGAGTGTCGCCGGACGAGAGCCTCGTTGAAATCGCTGAGGTAACCGAGCATTCGTGGATGGTGGGTTCACAATTCCATCCCGAATTTCAATCGAAACCGCTTGCACCGCATCCGCTTTTCCGGGAATTTATTTCGGCAGTGCTATGCTATCAAGCGGAAACAAGGGAATGCGTACCTCTCGAAAATTAA

Transcript

ANN25072-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8R720	CTP synthase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=pyrG PE=3 SV=1
Q3AFT7	CTP synthase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=pyrG PE=3 SV=1
Q97F61	CTP synthase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W) OX=272562 GN=pyrG PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002829 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02348 all species →	CTP_transf_3	Cytidylyltransferase	Family	Interproscan
PF06418 all species →	CTP_synth_N	CTP synthase N-terminus	Domain	Interproscan
PF00117 all species →	GATase	Glutamine amidotransferase class-I	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004528 all species →	Family	3-deoxy-D-manno-octulosonate cytidylyltransferase	Interproscan
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR003329 all species →	Family	Acylneuraminate cytidylyltransferase	Interproscan
IPR017456 all species →	Domain	CTP synthase, N-terminal	Interproscan
IPR004468 all species →	Family	CTP synthase	Interproscan
IPR033828 all species →	Domain	CTP synthase GATase domain	Interproscan
IPR017926 all species →	Domain	Glutamine amidotransferase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11550 all species →	CTP SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008690 all species →	Molecular Function	3-deoxy-manno-octulosonate cytidylyltransferase activity	Interproscan
GO:0003883 all species →	Molecular Function	CTP synthase activity	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0006241 all species →	Biological Process	CTP biosynthetic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019856 all species →	Biological Process	pyrimidine nucleobase biosynthetic process	Interproscan
GO:0042802 all species →	Molecular Function	identical protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN25072-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.