Detailed information of ANN25088-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:11718906...11727651
NR annotation: CAH3134956.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JIM3DNA excision repair protein ERCC-6-like 2 OS=Mus musculus OX=10090 GN=Ercc6l2 PE=1 SV=3
Q5T890DNA excision repair protein ERCC-6-like 2 OS=Homo sapiens OX=9606 GN=ERCC6L2 PE=1 SV=3
A3KMX0DNA excision repair protein ERCC-6-like 2 OS=Bos taurus OX=9913 GN=ERCC6L2 PE=2 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002555 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271
all species →
Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF14773
all species →
VIGSSKHelicase-associated putative binding domain, C-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650
all species →
DomainHelicase, C-terminal domain-likeInterproscan
IPR049730
all species →
DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR050496
all species →
FamilySNF2/RAD54 Helicase and DNA RepairInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR029256
all species →
DomainHelicase-associated putative binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45629
all species →
SNF2/RAD54 FAMILY MEMBERInterproscan

 Gene Ontology
No Gene Ontology signature was detected for ANN25088-RA. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN25088-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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