Gene detail

Detailed information of ANN25130-RA in Montipora grisea

Genomic Location: Scaffold_161__1_contigs__length_177188:131807...133986
NR annotation: PCJ23665.1, UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Rickettsiales bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN25130-RA

ATGGACAGTATTATAATTCAGGGCGGGATTCCTTTAGTCGGAGAAATTACTATCAGTGGTTCAAAGAATGCGTCCCTACCATTGATGGCAGCTTCATTAATTACAGATCAAGCCTTGATATTAAGTAACATACCTCGGCTATCTGATATTAACACTATGAATCAATTGCTAGTCAATCATGGTACAAAAATCACATCAGAAAGACAAAGAGATAGTAGTTTAAAATTAACATTATCTTCAAAATTTATTGATAATTATTTAGCTCCCTATGATATCGTACGTAAGATGCGTGCCTCTATATGGGTGCTAGGACCGTTACTAGCAAGGTTTGGTGAGGCTAAGGTCTCTCTGCCCGGTGGTTGTGCTATTGGTTCTAGGCAGGTTGATTTGCACATAGCTGTAATGAAGGCCATGGGTGCTAAGGTCACAATTGAACAGGGATATATACACGCAACTGTGGAAGGCCATTTGAAGGGGTGCGATTTTTCTTTTGACAAGCCATCTGTTGGAGCGACAATCAATGCTATTTTTGCAGCCGTTCTATGTGATGGTACAATGCACTTGTCAAACTGTGCTCACGAACCCGAGATTGTTGATTTATGTAATTGTCTAAACCAAATGGGGGCAGACATTAATGGAATTGGTACAAGTGAGCTTAGAATAATTGGCAAAGAGAGATTATTTGGTACAAATTATAAAGTGCTTCCAGATCGTATCGAAGCCGGAACCTATATGATAGCAGCGGCAGCGACTAAGGGTGATATAAAGTTGCTAGTAAGAATAAAGGAAGCTGGGGTCAATGTAGAAACTGGTAAAAATTATATTCGTGTTAGCCATAAAGGTAAGATAAAACCGGTCAATATTTCAACTCAGCCATATCCTGGATTCTCTACTGACTTACAAGCCCAATTTATGTGTTTAATGACTCTTGCATCAGGTGTTTCTACTATTTCAGAGAATATTTTTGAAAATCGTCTTATGCATGTTCCAGAATTATGCAGAATGGGTGCCAATATAACTGTAAATGGTAATAATGCGGTAATACAAGGTGTTGAGTCTTTAACTGGTACGGAAGTTATGGCTAGCGATTTGCGCGCGTCGGTATCGTTAATTATAGCTGGTTTGTGCGCGCGGGGTGAGACTAAGTCAGTGATTAAAGAGAATAATATTATTGATGGGAGAAAAATTAGTGAGAATATACTCAGTAATTTAAAACGTCAAATAGAAACAAATAAAATCTTCGCTAAATTGGCAATTATTCTTGTTGGCGACGATAGTGTAAGTGCAATTTATGTACAGAATAAAATTAAGGCCGCACAAAAAGTTGGAATAATTACGGAACTTAAGAAATTTGACTGTGAGATTTCAGAAAAAGAACTATTGGAAGAGATTGGCCAGCTAAATGCTGACAAAGACGTATCTGGAGTTATTATACAGATGCCATTACCGTTACATATATCTAAATCTAATGTAATTATGGCTATTGATCCCAGGAAAGATGTTGATGGGTTTCATCCTGTAAATGTTGGCAAGCTTTATAGTCCCTATGAACATGGGTTTGTACCATGTACTGCTCGAGGCTGTTTGCAGTTAATCAAGAATTGTATAGTTGATTTAAAAGGTAAAAATATAGTAGTAATTGGTCGTTCAAATATTGTTGGCAGACCACTTGCTGCATTATTGTTAAAAGAGGATTGTACCGTTACTATTTGTCATTCAAAAACTAAAAATCTTGCAACTATTACTTACACAGCGGATATTGTTATTTCAGCAATGGGAAGACCAAAATTTCTTACAGATAAATATTTCAACTCACGTGCTATTGTAATTGATGTTGGAATCAATAGGCTAGTATCTAAAAATAAATGCGAGCTAGTTGGTGATGTTGATTTTCAATTTGTAAAAAACAAGGTAAGATATATTACGCCAGTGCCTGGTGGTGTTGGTCCTATGACTGTAGCATATTTACTTGTTAATACTTATATTGCTAAAATAGGAATAGAAAATTATAAATCTTTATTATGA

Transcript

ANN25130-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8GW63	UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=murA PE=3 SV=1
Q1RHT9	UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=murA PE=3 SV=1
C3PP14	UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Rickettsia africae (strain ESF-5) OX=347255 GN=murA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010619 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00275 all species →	EPSP_synthase	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)	Family	Interproscan
PF00763 all species →	THF_DHG_CYH	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain	Domain	Interproscan
PF02882 all species →	THF_DHG_CYH_C	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001986 all species →	Domain	Enolpyruvate transferase domain	Interproscan
IPR005750 all species →	Family	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	Interproscan
IPR020630 all species →	Domain	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain	Interproscan
IPR046346 all species →	Homologous_superfamily	Aminoacid dehydrogenase-like, N-terminal domain superfamily	Interproscan
IPR020631 all species →	Domain	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain	Interproscan
IPR000672 all species →	Family	Tetrahydrofolate dehydrogenase/cyclohydrolase	Interproscan
IPR036968 all species →	Homologous_superfamily	Enolpyruvate transferase domain superfamily	Interproscan
IPR013792 all species →	Homologous_superfamily	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta	Interproscan
IPR020867 all species →	Conserved_site	Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR050068 all species →	Family	UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA subfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43783 all species →	UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016765 all species →	Molecular Function	transferase activity, transferring alkyl or aryl (other than methyl) groups	Interproscan
GO:0008760 all species →	Molecular Function	UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity	Interproscan
GO:0019277 all species →	Biological Process	UDP-N-acetylgalactosamine biosynthetic process	Interproscan
GO:0004488 all species →	Molecular Function	methylenetetrahydrofolate dehydrogenase (NADP+) activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN25130-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.