Gene detail

Detailed information of ANN25152-RA in Montipora grisea

Genomic Location: Scaffold_82__1_contigs__length_325266:238958...242308
NR annotation: RKU20793.1, peptidase [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN25152-RA

ATGCAAAAAGGATGGAAGTTCTTCTTCCACCCTTCCAATCTTCCGAATTCTACAAGGAAAGGAAAATTAAAAAAATTGATAGCTGGATATTATAGATTTCCGACAATTTGTCAAGAGACCATTGTTTTTATATGTGAAGATGATTTGTGGACGGTCTCCGTTGGCGGTGGGGTTGCGAGGCGACTCACCTTGAATCTCGGTGCGGCGAGTTCTCCACGCTTGTCGCCCGATGGTGAACTGCTTGCATTCACCGGACGCGAAGAGGGACCATCAGAGGTTTATGTGATGCCTGCGCTCGGCGGCGAAGCGAAGCGGCTCACCTATCAAGGGGGCAACGCTGCTATCGTCGACTGGGATGCCGATGGCAAGTCGATTCTCTATTCCAGTAACGCCGGTTTGGCATTTGATCCGTGGATATGGAAAATCTGTGCAGAGGGCGGTGAACCCCAACGCCTTTCGTACGGTCCTGCGAATCATATCGATTTCAGTGCTGCTGGCGGCGTTGTCCTCGGTAGATTGACCCGCGAACCCGCACGCTGGAAACGCTACCGCGGCGGTACTGCTGGGCAAATCTGGGTTGACTCGGACGGGGATGGACAATTTCAGCCCTTGGCACCCGTGGATAGTAATTTCACAACCCCGATGTGGATCGGTGAACGTATCTATTTTATTTCTGATCATGAAGGTGTTGGCAATATCTATTCCTGCCTCCCTACGGGTGAAGACATTCAACGTCACACGCATCAGGATACCTATTACTGTCGTTCCGCTCAGACCGATGGGACACGTATCGTCTATCATGCGGGGGCAGACCTATTTGTTTATGAAATTGAAAGCGACACTGAAACCCGTGTTGATGTCGATTTTCACAGCCCGCGTACCCAGCGACAACGGAAGTTCGTCAGTCCGTCGCGCTATCTGCAGGATTATGCCCCGACGCCAGATGGTCACGCATTGGCAGTGACCGTTCGAGGGAAACCCTTTACAATGGCGAATTGGGAGGGAGCGGTTCTCCAGCACGGCGAGCGCAACGGAACGCGTTATCGTTTTACGGAGTGGCTCAATGATGGCAAGCGTCTTGTTACGCTTTCCGATGCCGAGGGTGAAGAGGCACTCGAAATCCATACGCGCGATGGGAGCACTGATGTCGTTCGATTGGACACTCTTGACATCGGGCATGTTCGGCAGCTTGCGGTCGCTCCGCAAACCGAAGGCGATGAGAAGGATCGATTGCTTCTTATCAATAATCGTCTTGAACTTTTGCACATCGATTTAGAGACACAAGAGATACGGGTGCTTGACAAAGGACATTATCAGAATATCCGAGATGTCGCGTGGTCGCCTGATGGTAAATGGTGTGCCTATAGTTTTGCATCTACGGAAACCACTCGTTCAATCAAACTCTGTAAAATTGAGACGGGTGAGACGTGGTTCGTCACGGATCCAGAATTCAACGATTTCGGGCCGGCGTGGGATCCGGAGGGGAAGTATCTCTATTTTCTCTCTTATCGCGAGTTCAATCCGGTCTACGACGCGCTCCACTTTGATCTTGGGTTTCCTACAGCGATGCGTCCTTTGCTGGTGACCTTGCAGGAGACATTGGGTAATCCGTTTATCCCGGAGCCTCGTCCGCTTGAGGAGGAAAAGGAAGATAAGGATGAGAAAGATGAAGGAGAGAAGGAAAAGGACAGCGAGGATAAGGCATCTGACGAGAAATCCGAGCAGAAAGCGGAGAAACTGATTACAATAGATCTGGAAGGTATTACACAACGCGTTGTCGCATTCCCGTATCCGCACGGGCGTTACGGACAGATCGCTGGTATTGAAGGCAAAGCGATTTTTACGGCGTTTCCGGTGCAAGATACACCCGCAGACGATGAGGATAGCAGACCGAGAGGCGTCCTTCATGCCTATGACTTCAAGGAGCAGAAGAAGGAAACACTTGTCTCTGGCATTAATGATTTTCAACTTTCGCGTGATGCAAAAACGCTCGTCTATTCCACTGGCAGTCGGTTGCGCGTTATCAGGGCAGGTAAAAAGGCTGAAGGCGATTCCAAGGCCGAGAGTCGGGGTGCTCCAAGTCGGCAGACCGGTTGGATTGACCTGAGTCGTATCAAGGTCTCCGTTGTTCCGACGGCTGAGTGGCATCAGATGTATCGGGAGGCATGGCGGCTCCAGCGGGAGTATTTCTGGACAGAAGATATGTCTGGCGTGGATTGGGAGCATGTCTACCAACGTTATTTGCCGCTCCTTGACCGAATTGCGACGCGCGGTGAGTTTTCGGACTTGATGTGGGAGATGCAGGGGGAACTCGGCACCTCGCATGCGTATGAAACGGGTGGGGATTATCGGAGTTCGCCGAATTACGCACAGGGGTTCCTCGGTGCGGATTTTGCTTACGATGCGGAAAGTAATGGTTATCGTATCACACACATCGCTCGCGGTGATGGCTGGGAGGCGACAAAGGATTCACCACTCAATGCCCCTGGGATTAATATCCGTGAAGGCGATATTTTGCTTGCTATTGCTGGACAACGTGTCAGCGCAACCGTTTCACCGGGTGAACTGCTCGTGAGTCTCGCAAATCAGGAGGTTCAAGCGACGTTCCGAAGTGCGGATGATGGCGAGGAACGCGTCGTCACGCTCAAGGTGCTGGGAAGTGAAAGTGAACTTCGGTACCGTGAATGGGTATCCAGAAATCGGCGGTATGTCCATGAAAAAACGGATGGTAAAATCGGGTATGTGCATATTCCTGACATGGGACGGCGTGGGTATGCAGAATTTCACCGCGGTTTCCTCGCCGAGGTGAGTTATCCCGGTCTGTTGGTGGATGTCCGCTACAATGGGGGTGGGCACGTCTCGCAACTGCTTTTAGAGAAGTTATCTCGGCGGCGCATTGGATATGACGTTCCGCGTTGGGGCACGCCGCACCCCTATCCAGATGCTTCCGTTTTGGGTCCGATGGTGGCTGTCACGAACGAGAATGCGGGTTCGGATGGCGATATTTTCTCGCACTGTTTCAAGTTGATGAAGTTGGGGCTACTCATCGGCAAGCGGACGTGGGGGGGTGTTATCGGTATTTCACCGCATCAGGCGTTTGTGGATAGAGGTGGCACAACGCAGCCGGAGTATTCTTTCTGGTTTGTTGACGTTGGCTGGAGTGTTGAGAACTACGGCACCGACCCGGATATAGAGGTGGATTATCGACCGCAAGATTATACGACAGAAGCCGATCCGCAGCTTGACCGCGCAATCGAAGAACTCCTCCGTCAGATGGAGGAGAATCCGCCAGAGGTTCCCGATTTCGGTGAACGTCCGCGTTTGACCTTGCCCACGCTGCCGAAAGCGTGA

Transcript

ANN25152-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P95871	Tricorn protease homolog OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=tri PE=3 SV=1
Q9RDE2	Tricorn protease homolog 1 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) OX=100226 GN=tri1 PE=1 SV=1
Q972G5	Putative Tricorn-like protease C-terminal subunit OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=triC PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0026493 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14684 all species →	Tricorn_C1	Tricorn protease C1 domain	Domain	Interproscan
PF03572 all species →	Peptidase_S41	Peptidase family S41	Family	Interproscan
PF07676 all species →	PD40	WD40-like Beta Propeller Repeat	Repeat	Interproscan
PF14685 all species →	Tricorn_PDZ	Tricorn protease PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029045 all species →	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR012393 all species →	Family	Tricorn protease	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR028204 all species →	Domain	Tricorn protease C1 domain	Interproscan
IPR005151 all species →	Domain	Tail specific protease	Interproscan
IPR011659 all species →	Repeat	WD40-like beta propeller	Interproscan
IPR029414 all species →	Domain	Tricorn protease, PDZ domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43253 all species →	TRICORN PROTEASE HOMOLOG 2-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008236 all species →	Molecular Function	serine-type peptidase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08676	tri; tricorn protease	EC:3.4.21.-	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.