Gene detail

Detailed information of ANN25332-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:16893693...16910870
NR annotation: CAH3015948.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q920F3	KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Khdrbs2 PE=1 SV=1
Q9WU01	KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Mus musculus OX=10090 GN=Khdrbs2 PE=1 SV=1
Q5VWX1	KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Homo sapiens OX=9606 GN=KHDRBS2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16274	Qua1	Qua1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR032571	Domain	KHDRBS, Qua1 domain	Interproscan
IPR004087	Domain	K Homology domain	Interproscan
IPR045071	Family	KH domain-containing BBP-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11208	RNA-BINDING PROTEIN RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0000381	Biological Process	regulation of alternative mRNA splicing, via spliceosome	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0048024	Biological Process	regulation of mRNA splicing, via spliceosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14942	KHDRBS3, SLM2; KH domain-containing, RNA-binding, signal transduction-associated protein 3	-	Spliceosome	ko03041	deepkoala