Detailed information of ANN25388-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:17868415...17872662
NR annotation: XP_020621211.1, lysine-specific demethylase 2A-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5U263Lysine-specific demethylase 2A OS=Xenopus tropicalis OX=8364 GN=kdm2a PE=2 SV=1
Q9Y2K7Lysine-specific demethylase 2A OS=Homo sapiens OX=9606 GN=KDM2A PE=1 SV=3
P59997Lysine-specific demethylase 2A OS=Mus musculus OX=10090 GN=Kdm2a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001471 (this species only)

 Pfam domain
No Pfam domain signature was detected for ANN25388-RA. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR050690
all species →		FamilyJHDM1 Histone DemethylaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23123
all species →		PHD/F-BOX CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006482
all species →		Biological Processprotein demethylationInterproscan
GO:0032452
all species →		Molecular Functionhistone demethylase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN25388-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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