Gene detail

Detailed information of ANN25396-RA in Montipora grisea

Genomic Location: Scaffold_143__1_contigs__length_192058:80561...81325
NR annotation: WP_089370554.1, exodeoxyribonuclease III [Dokdonia pacifica]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O26314	DNA uridine endonuclease OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=MTH_212 PE=1 SV=1
P37454	Exodeoxyribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=exoA PE=1 SV=1
P27695	DNA repair nuclease/redox regulator APEX1 OS=Homo sapiens OX=9606 GN=APEX1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR020848	Conserved_site	AP endonuclease 1, conserved site	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR004808	Family	AP endonuclease 1	Interproscan
IPR020847	Binding_site	AP endonuclease 1, binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22748	AP ENDONUCLEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004519	Molecular Function	endonuclease activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0003906	Molecular Function	DNA-(apurinic or apyrimidinic site) endonuclease activity	Interproscan
GO:0006284	Biological Process	base-excision repair	Interproscan
GO:0008081	Molecular Function	phosphoric diester hydrolase activity	Interproscan
GO:0008311	Molecular Function	double-stranded DNA 3'-5' DNA exonuclease activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01142	E3.1.11.2, xthA; exodeoxyribonuclease III	EC:3.1.11.2	DNA repair and recombination proteins	ko03400	deepkoala