Detailed information of ANN25415-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:18416659...18427851
NR annotation: XP_020616336.1, uncharacterized protein LOC110054296 isoform X1 [Orbicella faveolata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96GX1Tectonic-2 OS=Homo sapiens OX=9606 GN=TCTN2 PE=1 SV=1
Q4R9E0Tectonic-3 OS=Macaca fascicularis OX=9541 GN=TCTN3 PE=2 SV=1
Q6NUS6Tectonic-3 OS=Homo sapiens OX=9606 GN=TCTN3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005645 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →
RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF07773
all species →
TCTN_DUF1619Tectonic domain DUF1619DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040354
all species →
FamilyTectonicInterproscan
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR011677
all species →
DomainTectonic domainInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14611
all species →
TECTONIC FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0060271
all species →
Biological Processcilium assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN25415-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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