Detailed information of ANN25430-RA in Montipora grisea

Genomic Location: Scaffold_75__1_contigs__length_340297:73295...74203
NR annotation: MBM29955.1, hydroxymethylbilane synthase [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9KVM1Porphobilinogen deaminase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=hemC PE=1 SV=2
Q3SFT5Porphobilinogen deaminase OS=Thiobacillus denitrificans (strain ATCC 25259 / T1) OX=292415 GN=hemC PE=3 SV=1
Q8DD85Porphobilinogen deaminase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=hemC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01379Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainDomainInterproscan
PF03900Porphobil_deamCPorphobilinogen deaminase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022417DomainPorphobilinogen deaminase, N-terminalInterproscan
IPR000860FamilyPorphobilinogen deaminaseInterproscan
IPR036803Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan
IPR022418DomainPorphobilinogen deaminase, C-terminalInterproscan
IPR022419Binding_sitePorphobilinogen deaminase, dipyrromethane cofactor binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11557PORPHOBILINOGEN DEAMINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004418Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan
GO:0018160Biological Processpeptidyl-pyrromethane cofactor linkageInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01749hemC, HMBS; hydroxymethylbilane synthaseEC:2.5.1.61
Porphyrin metabolismko00860deepkoala

TOP