Gene detail

Detailed information of ANN25495-RA in Montipora grisea

Genomic Location: Scaffold_78__1_contigs__length_336227:179156...180626
NR annotation: MYA72443.1, NADH-quinone oxidoreductase subunit NuoF [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P56913	NADH-quinone oxidoreductase subunit F 2 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=nuoF2 PE=3 SV=2
Q56222	NADH-quinone oxidoreductase subunit 1 OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=nqo1 PE=1 SV=1
A8F0M0	NADH-quinone oxidoreductase subunit F OS=Rickettsia massiliae (strain Mtu5) OX=416276 GN=nuoF PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004063 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10589 all species →	NADH_4Fe-4S	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region	Domain	Interproscan
PF10531 all species →	SLBB	SLBB domain	Domain	Interproscan
PF01512 all species →	Complex1_51K	Respiratory-chain NADH dehydrogenase 51 Kd subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037207 all species →	Homologous_superfamily	NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily	Interproscan
IPR019575 all species →	Domain	NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain	Interproscan
IPR019554 all species →	Domain	Soluble ligand binding domain	Interproscan
IPR011538 all species →	Domain	NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain	Interproscan
IPR037225 all species →	Homologous_superfamily	NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily	Interproscan
IPR001949 all species →	Conserved_site	NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43578 all species →	NADH-QUINONE OXIDOREDUCTASE SUBUNIT F	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0008137 all species →	Molecular Function	NADH dehydrogenase (ubiquinone) activity	Interproscan
GO:0010181 all species →	Molecular Function	FMN binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00335	nuoF; NADH-quinone oxidoreductase subunit F	EC:7.1.1.2	Oxidative phosphorylation	ko00190	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.