Detailed information of ANN25566-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:22313236...22346415
NR annotation: CAH3109198.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZI89Trafficking protein particle complex subunit 11 OS=Gallus gallus OX=9031 GN=TRAPPC11 PE=2 SV=1
A6QLC7Trafficking protein particle complex subunit 11 OS=Bos taurus OX=9913 GN=TRAPPC11 PE=2 SV=1
Q1RLX4Trafficking protein particle complex subunit 11 OS=Danio rerio OX=7955 GN=trappc11 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003086 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12742
all species →		Gryzun-likeGryzun, putative Golgi traffickingDomainInterproscan
PF11817
all species →		Foie-gras_1Foie gras liver health family 1RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025876
all species →		DomainTrafficking protein particle complex subunit 11, C-terminalInterproscan
IPR021773
all species →		DomainTrafficking protein particle complex subunit 11Interproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14374
all species →		FOIE GRASInterproscan

 Gene Ontology
No Gene Ontology signature was detected for ANN25566-RA. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20308TRAPPC11; trafficking protein particle complex subunit 11-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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