Gene detail

Detailed information of ANN25584-RA in Montipora grisea

Genomic Location: Scaffold_1633__1_contigs__length_52131:31064...31659
NR annotation: XP_011403501.2, PREDICTED: E3 ubiquitin-protein ligase RNF19A-like [Amphimedon queenslandica]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P0C032	Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB3 PE=3 SV=2
P69310	Ubiquitin OS=Avena sativa OX=4498 PE=1 SV=1
P69313	Ubiquitin OS=Helianthus annuus OX=4232 PE=3 SV=2

Gene family	Subfamily
Ubiquitin Family	ULD\|UBL\|NEDD8
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR050158	Family	Ubiquitin and ubiquitin-like	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR019956	Domain	Ubiquitin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10666	UBIQUITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0019941	Biological Process	modification-dependent protein catabolic process	Interproscan
GO:0031386	Molecular Function	protein tag activity	Interproscan
GO:0031625	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan