Gene detail

Detailed information of ANN25600-RA in Montipora grisea

Genomic Location: Scaffold_684__1_contigs__length_79669:32722...33978
NR annotation: TFH48683.1, MAG: ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonadales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q60BE7	ATP-dependent Clp protease ATP-binding subunit ClpX 2 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=clpX2 PE=3 SV=1
Q0A6A8	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=clpX PE=3 SV=1
Q3JAJ9	ATP-dependent Clp protease ATP-binding subunit ClpX OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=clpX PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF10431	ClpB_D2-small	C-terminal, D2-small domain, of ClpB protein	Domain	Interproscan
PF06689	zf-C4_ClpX	ClpX C4-type zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010603	Domain	Zinc finger, ClpX C4-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR038366	Homologous_superfamily	Zinc finger, ClpX C4-type superfamily	Interproscan
IPR019489	Domain	Clp ATPase, C-terminal	Interproscan
IPR050052	Family	ATP-dependent Clp protease ATP-binding subunit ClpX	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48102	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0009376	Cellular Component	HslUV protease complex	Interproscan
GO:0051301	Biological Process	cell division	Interproscan
GO:0051603	Biological Process	proteolysis involved in protein catabolic process	Interproscan