Gene detail

Detailed information of ANN25675-RA in Montipora grisea

Genomic Location: Scaffold_63__1_contigs__length_395460:264171...265169
NR annotation: WP_200606220.1, microcin C ABC transporter permease YejB [Thermohalobaculum xanthum]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A9CKL3	Peptidoglycan transport system permease protein YejB OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=yejB PE=3 SV=1
P0AFU1	Inner membrane ABC transporter permease protein YejB OS=Escherichia coli O157:H7 OX=83334 GN=yejB PE=3 SV=1
P0AFU0	Inner membrane ABC transporter permease protein YejB OS=Escherichia coli (strain K12) OX=83333 GN=yejB PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0026495 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00528 all species →	BPD_transp_1	Binding-protein-dependent transport system inner membrane component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035906 all species →	Homologous_superfamily	MetI-like superfamily	Interproscan
IPR000515 all species →	Domain	ABC transporter type 1, transmembrane domain MetI-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30465 all species →	INNER MEMBRANE ABC TRANSPORTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042884 all species →	Biological Process	microcin transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13894	yejB; microcin C transport system permease protein	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.