Detailed information of ANN25738-RA in Montipora grisea

Genomic Location: Scaffold_100__1_contigs__length_260536:122541...125006
NR annotation: RKU12755.1, hypothetical protein C6502_05260 [Candidatus Poribacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P71359ATP-dependent DNA helicase RecQ OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=recQ PE=3 SV=1
Q9CL21ATP-dependent DNA helicase RecQ OS=Pasteurella multocida (strain Pm70) OX=272843 GN=recQ PE=3 SV=1
P15043ATP-dependent DNA helicase RecQ OS=Escherichia coli (strain K12) OX=83333 GN=recQ PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF09382RQCRQC domainDomainInterproscan
PF16124RecQ_Zn_bindRecQ zinc-bindingDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00570HRDCHRDC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR018982DomainRQC domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR032284DomainATP-dependent DNA helicase RecQ, zinc-binding domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR002121DomainHRDC domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR010997Homologous_superfamilyHRDC-like superfamilyInterproscan
IPR004589FamilyDNA helicase, ATP-dependent, RecQ typeInterproscan
IPR006293FamilyDNA helicase, ATP-dependent, RecQ type, bacterialInterproscan
IPR044876Homologous_superfamilyHRDC domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13710DNA HELICASE RECQ FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0009432Biological ProcessSOS responseInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03654recQ; ATP-dependent DNA helicase RecQEC:5.6.2.4
DNA repair and recombination proteinsko03400deepkoala

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