Detailed information of ANN25745-RA in Montipora grisea

Genomic Location: Scaffold_100__1_contigs__length_260536:197462...198680
NR annotation: MYD59923.1, tRNA pseudouridine(55) synthase TruB [Gemmatimonadota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2SML1tRNA pseudouridine synthase B OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=truB PE=3 SV=1
Q47D96tRNA pseudouridine synthase B OS=Dechloromonas aromatica (strain RCB) OX=159087 GN=truB PE=3 SV=1
A1JIX1tRNA pseudouridine synthase B OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=truB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02033RBFARibosome-binding factor AFamilyInterproscan
PF16198TruB_C_2tRNA pseudouridylate synthase B C-terminal domainFamilyInterproscan
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan
PF09157TruB-C_2Pseudouridine synthase II TruB, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000238FamilyRibosome-binding factor AInterproscan
IPR014780FamilytRNA pseudouridine synthase II, TruBInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR032819DomaintRNA pseudouridylate synthase B, C-terminalInterproscan
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan
IPR023799Homologous_superfamilyRibosome-binding factor A domain superfamilyInterproscan
IPR015946Homologous_superfamilyK homology domain-like, alpha/betaInterproscan
IPR036974Homologous_superfamilyPUA domain superfamilyInterproscan
IPR015240DomaintRNA pseudouridine synthase II, TruB, subfamily 1, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13767TRNA-PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

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