Gene detail

Detailed information of ANN25766-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:27542577...27547996
NR annotation: CAH3110566.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5EBL4	RILP-like protein 1 OS=Homo sapiens OX=9606 GN=RILPL1 PE=1 SV=1
Q17QG3	RILP-like protein 1 OS=Bos taurus OX=9913 GN=RILPL1 PE=2 SV=1
A0PJP4	RILP-like protein 1 OS=Xenopus tropicalis OX=8364 GN=rilpl1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006566 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11461 all species →	RILP	Rab interacting lysosomal protein	Family	Interproscan
PF09744 all species →	Jnk-SapK_ap_N	JNK_SAPK-associated protein-1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051241 all species →	Family	DZIP and RILPL	Interproscan
IPR021563 all species →	Domain	Rab interacting lysosomal protein, dimerization domain	Interproscan
IPR034743 all species →	Domain	RH1 domain	Interproscan
IPR034744 all species →	Domain	RH2 domain	Interproscan
IPR019143 all species →	Domain	JNK/Rab-associated protein-1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21502 all species →	ZINC FINGER PROTEIN DZIP1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20173	RILPL1; RILP-like protein 1	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.