Gene detail

Detailed information of ANN25769-RA in Montipora grisea

Genomic Location: Scaffold_84__1_contigs__length_319532:25842...30443
NR annotation: MCT4683584.1, aerobic carbon-monoxide dehydrogenase large subunit [Roseicyclus sp.]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN25769-RA

ATGGGCTCGGCCCGCAAACGGGTCGAGGATGTGCGCTTCACCCAAGGCAAGGGCAATTATGTCGACGATATCAAGCTGGACGGCATGCTGTTCGGTGATTTCGTGCGCAGCCCTTACGCCCATGCCCGGGTGATCTCGGTCAATAAAGAGGCGGCCATGGCCCTTCCGGGCGTGCACGCGGTGCTGACGGCCGAGGATCTGGCGCCGCTAAGCCTGCATTGGATGCCGACGCTGGCGGGCGACAAGCAAATGGTTCTGGCCGACGGCAAGGTGCTGTTCCAGGGTCAGGAGGTTGCCTTTGTCATCGCCGATGACCGCTATATCGCGGCGGATGCGGTGGAACTGGTCGAGGTCGAGTACGAGGAACTGCCCGTCGTCACCGATCCGTTCAAGGCGATGGAGCCCGACGCGCCCGTACTGCGCGAGGACCTGGCGGGCGTGGGAGGCACGATTCCCGAGGGTGCGCATGGGCCGCGCCGCCACCACAACCACATCTTCACCTGGGAACAGGGAGACAAGGAGGCGACCGAGGCGGTGATCGATGGCGCGGACGTCGTGGCCGAGGAGATGATCTATTACCATCGCACGCATCCCTGCCCGCTCGAGACCTGCGGGTCCGTTGCCAGCATGGATAAGGTGACCGGCAAGCTGACGCTTTGGGGCACATTCCAGGCCCCGCACGCGATCCGCACCGTGGTCTCACTGATCTCAGGGATCGCCGAGCACAATATCCGCGTGATCAGCCCCGACATCGGCGGCGGTTTTGGAAACAAGGTCGGGGCCTATGCGGGCTATGTCTGCTCGGTCGTGGCCTCCATCGTGACCGGCAAGCCTGTGAAATGGGTCGAGGACCGGATGGAAAACCTGATGTCCACCGCCTTCGCCCGGGATTATTGGATGCAGGGCAAGATCGCGGCGACCAAGGAAGGCAAGATCACCGGTCTGTGGTGCCACACGACCGCCGATCATGGCGGTTTCGACGCTTGCGCCGATCCGACCAAGTTCCCGGCGGGGTTTATGAACATCTGCACCGGGTCCTATGACATCCCCACCGCCTATCTGGCCGTGGACGGGGTCTACACCAACAAGGCCCCGGGCGGGGTCGCGTACCGGTGCAGCTTCCGGGTGACGGAGGCCGCGTACTTTATCGAACGCATGATCGAGGTGCTGGCCATCGAGCTGGATATGGATGCGGCGGAATTGCGCCGGATCAACTTCATCAAGGCCGATCAGTTCCCCTATCAGTCCGCTCTGGGCTGGGAATACGATAGCGGCGATTATCACACCGCCTGGGGCAAGGCGCTGAAGGCGGTCGATTATGACGGGTTGCGGGCCGAGCAAGCGCAACAGGTCGAGGACTTCCGCGCGGGTAAGACGCGGAAACTGATGGGCATCGGCCTGACGCATTTCACCGAGATCGTCGGCGCGGGGCCGGTCAAGAATTGTGACATCCTCGGGCTAGGCATGTTCGACAGTTGCGAGATCCGCATCCACCCCACCGGGTCGGCGATTGCGCGGCTGGGCACGATCAGCCAAGGCCAGGGCCACGCAACGACCTTCGCGCAGATCCTGGCATCCGAGATTGGCCTGCCCGCCGACGACATCACCGTCGAGGAAGGGGATACGGATACGGCGCCCTACGGGCTGGGCACCTACGGGTCGCGCTCAACCCCTGTGGCGGGTGCTGCCACGGCCATGGCCGGGCGCAAGATCCGGGCGAAAGCTCAGATGATCGCGGCCTATCTGCTCGAGGTTCACGACGACGACGTGGAATTCGACATCGACCGTTTCGCGGTCAAGGGCGCGCCCGAACGCTTCAAGACGATGAAGGAAATCGCGTTCGCCGCCTATAATCAAGCGATCCCCGGGGTCGAACCGGGACTGGAGGCGGTCAGCTATTACGATCCGCCCAACATGACCTATCCGTTCGGGGCCTATATCTGTGTACTAGACATCGACGTGGACACGGGAGAGGTCGATATCCGCCGCTTCTACGCGCTGGACGATTGCGGGACGCGCATCAACCCGATGATCATCGAGGGCCAGGTGCATGGCGGGCTGACCGAGGCGCTGGCCATCGCGATGGGACAGGAGATCGCCTATGACGAGCACGGCAACCACAAGACGGCGACGCTGATGGACTTTTTCGTGCCGACGGCCTGGGAGACGCCAACCTGGGAGACCGATCACACGACCACGCCCAGCCCGCATCACCCGATCGGGGCGAAAGGTGTGGGCGAAAGCCCGAATGTCGGCGGGGTGCCCTGTTTCTCGAATGCGGTGCACGATGCGTTCCGGCCCTTCGGCCTGACCCAGAGCCATATGCCGCACGATCACTGGCGGATCTGGCAGGTGGCGAACCGGCTGGGGTTGCATGGGTACTTTCGGCCAGACGAAGAGGGATCGGATTCGGTGAGCCATTCCGAAGTACAGAGCGCATTGGCAGGTGCCGGGTATGTCGCACCAGAAGACCTGGCCATGGCGCTACACCTTGCGCTGGTGCTGGGGCGGCCCTTGTTGCTGGAGGGTCCTGCCGGGGTCGGCAAGACCGATCTGGCGAAGGCTTTGGCGGCGGTGAAGGACGCACGGCTGATCCGGCTGCAATGCTATGAAGGGCTGGATGCCGCGCAGGCAATCTATGAATGGAACTACCAACGGCAATTGCTGGCGCTGCGCGCCTCAGATGCGGGATCTGAGGATGCGGTTTTCACCGACAAATACCTGCTGAAGCGGCCTTTGCTGGAAGCCATCAGTCAGTCCGACCCACCGGTTCTGTTGATCGACGAGATCGACCGGGCGGACGAGGCGTTCGAGGCGTATCTGTTGGAAATCCTCGCCGAGGGCCAGATCACGGTGCCCGAGCTTGGCACGATCAACGCGGTTTCGGCGCCGATGGTGGTGCTAACCTCCAACGGCACGCGCGAGCTGTCGGATGCGCTGCGCCGGCGATGCCTCTATTCCTATATCGACTATCCCTCGCGCGAGATGGAGCTGACCATTCTGCGCACCCCGGGCGCCGGGGATCGAGGCGCATCTGGCCACCCAGATCGTTCACACGGTCCAAGCCATCCGGCGCGAAGAACTGGAGAAAGTGCCCGGCATCGCCGAAATGCTGGACTGGGCGGCGGCGCTGTCCGGGCTTGGCATCAACGACCTCTCGGAGAACCCAGAAACCGTAGCCACGACCTTGGTCTGTCTGCTGAAGACAGCGGCCGACCGGGATACCGTGCCGCCCGAAGTTCTGGCCCGGATCGTGGGCAAAGCGGCCTGATGCGCGCGACCCGGTTTCCAGAACGGGCCTCCGGCCCAGCCGAGCGCTTGACGGGCTTCATCGCCCATCTGCGCATGAACGGTCTGCGGGCCGGACCGCGCGAGACCCAGGATGCCATCGCAGCCTTGGGCGCGGTGAACGCCGCCAACCCCACCCAGGCCCGCATGGCGCTGAAGGCGCTGCTGGTGCCGGACCAGGATGGCTGGCACGTTTTCGATGACCTTTACGACGCCTATTGGTTCAACACGGGCAAGCAACGCGGAGCCGAAGTCAAAGCCGATCATATCCGCACGCAGTCGGCGCGCCCGACGCTGTGGCAGCGCCATATGGACCAGGATGCGGATGGCGCCGAAAGCGGCGATGATGCCCGGCCCGATGCGGGCGATGGCGAGGCCGAGGGCACGGACGGACGCCTAATCGCCACCCGAACCGCGAACCTGACGCGGCGCGACCTGCGCGAATTGATGGACGAGGACAGCTTGCGCGCCGCCGAGCGCGCCGCAGAGCGGCTGGCCAAAGCACTCCGCGACCGGCGTTCCCGCCGGCATCGGGCGGCGACGAGGGGTGCAAGGCTGGACCTGCGCCGGACGCTGCGAGCCAGTCTGGCACGCGGAGGCGAACCGTTAGACCTGCTCCGCCGCCATCGGCCGGATCGGCCGTTGAAGATCGTGGCGCTCTTGGATGTTTCTGGCTCGATGACGGTCTATGCCCGGGTATTCCTGGCCTTTCTGAAAGGGCTGACAGGGGCGGATACAAGCACGGATGCGTATCTATTCCACACGCGCCTGATGCGCGTGACGCCAGCCTTGCGCGATCACGATACGCTGCGCGCGGCCGCGCGGCTGAGCCTGATGGCCGAAGGCTTCGGCGGCGGCACGGATATCGCGGGGGCGGTGGCCGGGTTCAACAGCTCCTACGCCGCGCGCGCCGTCGACGGGCGTACCGTGGTGCTGATCCTCTCGGACGGCTATTGCACCTCGCCGCCCGAAGCGTTGGGCGCCGCGTTGGCCAAGCTGCGCCGACGGGCGCACCGGATCGTCTGGCTGAACCCTCTGCTAGGCTGGCGCGATTACGCGCCGGTCGCGCGCGGCATGGCGGCGGCGCTTCCGCATCTGGACGCGCATCTACCCGCAAACACCATCGAGGCGCTGAGCGCCTTGGAACCCGAATTCGCTAAAATCGGAAGGAGAGCGCCATGGAACTGGCCGATGAAATCCGTGTGA

Transcript

ANN25769-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P19919	Carbon monoxide dehydrogenase large chain OS=Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=coxL PE=1 SV=2
P19913	Carbon monoxide dehydrogenase large chain OS=Hydrogenophaga pseudoflava OX=47421 GN=cutL PE=1 SV=2
D7REY3	Caffeine dehydrogenase subunit alpha OS=Pseudomonas sp. (strain CBB1) OX=765715 GN=cdhA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0016661 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20256 all species →	MoCoBD_2	Molybdopterin cofactor-binding domain	Domain	Interproscan
PF07728 all species →	AAA_5	AAA domain (dynein-related subfamily)	Domain	Interproscan
PF01315 all species →	Ald_Xan_dh_C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	Domain	Interproscan
PF05762 all species →	VWA_CoxE	VWA domain containing CoxE-like protein	Family	Interproscan
PF02738 all species →	MoCoBD_1	Molybdopterin cofactor-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR012780 all species →	Family	Carbon-monoxide dehydrogenase, large subunit	Interproscan
IPR046867 all species →	Domain	Aldehyde oxidase/xanthine dehydrogenase, second molybdopterin binding domain	Interproscan
IPR000674 all species →	Domain	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead	Interproscan
IPR011704 all species →	Domain	ATPase, dynein-related, AAA domain	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR016208 all species →	Family	Aldehyde oxidase/xanthine dehydrogenase-like	Interproscan
IPR008912 all species →	Family	Uncharacterised protein family CoxE-like	Interproscan
IPR008274 all species →	Domain	Aldehyde oxidase/xanthine dehydrogenase, first molybdopterin binding domain	Interproscan
IPR037165 all species →	Homologous_superfamily	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily	Interproscan
IPR036856 all species →	Homologous_superfamily	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11908 all species →	XANTHINE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005507 all species →	Molecular Function	copper ion binding	Interproscan
GO:0018492 all species →	Molecular Function	obsolete carbon-monoxide dehydrogenase (acceptor) activity	Interproscan
GO:0030151 all species →	Molecular Function	molybdenum ion binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN25769-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.