Detailed information of ANN25810-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:28327910...28334580
NR annotation: XP_020629852.1, uncharacterized protein LOC110066935 [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6H6W9Sin3 histone deacetylase corepressor complex component SDS3 OS=Bos taurus OX=9913 GN=SUDS3 PE=2 SV=1
Q9H7L9Sin3 histone deacetylase corepressor complex component SDS3 OS=Homo sapiens OX=9606 GN=SUDS3 PE=1 SV=2
Q5RBB8Sin3 histone deacetylase corepressor complex component SDS3 OS=Pongo abelii OX=9601 GN=SUDS3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004599 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08598
all species →
Sds3Sds3-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013907
all species →
FamilySds3-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21964
all species →
BREAST CANCER METASTASIS-SUPPRESSOR 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →
Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0042826
all species →
Molecular Functionhistone deacetylase bindingInterproscan
GO:0070822
all species →
Cellular ComponentSin3-type complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN25810-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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