Gene detail

Detailed information of ANN25812-RA in Montipora grisea

Genomic Location: Scaffold_194__1_contigs__length_156010:133749...134351
NR annotation: RKU31145.1, NADH-quinone oxidoreductase subunit B [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4SF47	NADH-quinone oxidoreductase subunit B OS=Chlorobium phaeovibrioides (strain DSM 265 / 1930) OX=290318 GN=nuoB PE=3 SV=1
B3EKA0	NADH-quinone oxidoreductase subunit B OS=Chlorobium phaeobacteroides (strain BS1) OX=331678 GN=nuoB PE=3 SV=1
B4S752	NADH-quinone oxidoreductase subunit B OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) OX=290512 GN=nuoB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003278 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01058 all species →	Oxidored_q6	NADH ubiquinone oxidoreductase, 20 Kd subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006138 all species →	Family	NADH-ubiquinone oxidoreductase, 20 Kd subunit	Interproscan
IPR006137 all species →	Domain	NADH:ubiquinone oxidoreductase-like, 20kDa subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11995 all species →	NADH DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008137 all species →	Molecular Function	NADH dehydrogenase (ubiquinone) activity	Interproscan
GO:0048038 all species →	Molecular Function	quinone binding	Interproscan
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0009060 all species →	Biological Process	aerobic respiration	Interproscan
GO:0015990 all species →	Biological Process	electron transport coupled proton transport	Interproscan
GO:0045272 all species →	Cellular Component	obsolete plasma membrane respiratory chain complex I	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00331	nuoB; NADH-quinone oxidoreductase subunit B	EC:7.1.1.2	Oxidative phosphorylation	ko00190	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.