Genomic Location: Scaffold_2__1_contigs__length_39127999:28359548...28365165
NR annotation: CAH3153620.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families
| CDS |
| ANN25813-RA |
| Transcript |
| ANN25813-RA |
| Protein |
| ANN25813-RA |
| UniProt accession | Description |
|---|---|
| Q8CIN9 | E3 ubiquitin-protein ligase rififylin OS=Rattus norvegicus OX=10116 GN=Rffl PE=1 SV=1 |
| Q8WZ73 | E3 ubiquitin-protein ligase rififylin OS=Homo sapiens OX=9606 GN=RFFL PE=1 SV=1 |
| Q99KR6 | E3 ubiquitin-protein ligase RNF34 OS=Mus musculus OX=10090 GN=Rnf34 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008993 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13920 all species → | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF01363 all species → | FYVE | FYVE zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR051728 all species → | Family | RING-FYVE domain-containing E3 ubiquitin-protein ligase | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR017455 all species → | Domain | Zinc finger, FYVE-related | Interproscan |
| IPR036361 all species → | Homologous_superfamily | SAP domain superfamily | Interproscan |
| IPR000306 all species → | Domain | FYVE zinc finger | Interproscan |
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR004595 all species → | Domain | TFIIH C1-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14879 all species → | CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0043161 all species → | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0061630 all species → | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0070936 all species → | Biological Process | protein K48-linked ubiquitination | Interproscan |
| GO:1902042 all species → | Biological Process | negative regulation of extrinsic apoptotic signaling pathway via death domain receptors | Interproscan |
| GO:2001271 all species → | Biological Process | obsolete negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis | Interproscan |
| GO:0046872 all species → | Molecular Function | metal ion binding | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K20804 | RNF34; E3 ubiquitin-protein ligase RNF34 | EC:2.3.2.31 | Ubiquitin system | ko04121 | deepkoala |
