Detailed information of ANN25815-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:28386367...28386795
NR annotation: XP_015762451.1, PREDICTED: thioredoxin-like protein 4A [Acropora digitifera]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P83876Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1
P83877Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1
Q9FE62Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001390 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02966
all species →		DIM1Mitosis protein DIM1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004123
all species →		FamilyDim1 familyInterproscan
IPR036249
all species →		Homologous_superfamilyThioredoxin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12052
all species →		THIOREDOXIN-LIKE PROTEN 4A, 4BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0046540
all species →		Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0005681
all species →		Cellular Componentspliceosomal complexInterproscan
GO:0005682
all species →		Cellular ComponentU5 snRNPInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12859TXNL4A, DIB1; U5 snRNP protein, DIM1 family-Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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