Gene detail

Detailed information of ANN25972-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:31820262...31822634
NR annotation: XP_020613950.1, homeobox protein BarH-like 1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A8XJD0	Homeobox protein ceh-30 OS=Caenorhabditis briggsae OX=6238 GN=ceh-30 PE=3 SV=1
Q6R3Q6	Brain-specific homeobox protein homolog OS=Danio rerio OX=7955 GN=bsx PE=2 SV=1
Q22909	Homeobox protein ceh-30 OS=Caenorhabditis elegans OX=6239 GN=ceh-30 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR050848	Family	Homeobox domain-containing transcription factors	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24333	HOMEO BOX HB9 LIKE A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09361	BARX; BarH-like homeobox	-	Transcription factors	ko03000	deepkoala