Gene detail

Detailed information of ANN25982-RA in Montipora grisea

Genomic Location: Scaffold_140__1_contigs__length_196562:28717...31577
NR annotation: CAE7459759.1, gcvPB [Symbiodinium pilosum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN25982-RA

ATGCTGGCACGCATCGGTACCGCGTCCATCGACGAACTGTTCGACGAGATCGACCCGGCGTTGACCGGGGCCGATTTCGGCGCACTCCCGACCGGCGTGGACGAAATGACCATGCTGGCCGGCCTGACGGCACGTGCGCGTCGCGACGAAGCGGGTCCCTGCTTCATCGGTGCCGGGTGCTACGACCACCACGTTCCGGCGGCGGTGTGGGACATCGCCGGGCGCGGCGAATTCATGACCGCGTACACGCCCTATCAGGCGGAAGCGAGCCAGGGCACGCTGCAGGTCATCTATGAATACCAGTCCATGATGACCGCCCTCACCGCCATGGACGTCACCAACGCCTCGGTCTACGACGGCGGTTCGGCCTTGGGCGAGGCCGTGCTGATGGCCGTGCGGACCAGCCGCCGCCGCCGTGCCACCGCACCGGCCCGCATCGCCGTTGCCGGGCCGTGCCATCCACTCTATCTGGATGCCGCCCGCACGATCACCCGCAACCAGGACATCGAGATCGCCGCGCCGGCGATCGCCGCGGATGGCCGGGCGGATCTCGCCGCTCTCGACGCCATGCCGGCAGCCGTCGCCGTTGTGTTGCAGCAACCCAATTTCCTGGGTTTGATCGAGCCCGTGGACGCAGTGGCCAAGTGGGCCGCCGAGCGCGGCGTCATGGTGATCGCGGTGGTCAATCCGACCACGCTGGCGGTACTGAAGCCGCCCGGCCGATGGGGTGACGCCGGTGCCGACATCGTGTGCGGCGACGGTCAGCCGCTCGGCCCGCGAACAGCACATCCGCCGTGCCAAGGCGACGTCCAATATCTGCACGAACCAAGGCTTGCTGGTGACCGCAGCGACGATCTATCTGGCACTGATGGGGGCGCAAGGGCTGCGCCGGGTCGCCGCCCGATGCCATGCGCGCACCCGCGCCCTGGTCGAGGCGTTGACGAGCATCGAGGGCGTGCGCCGGCGCTTCGACGGCCCGTTCTTCCACGAATGCGTCGTCGAGATCGGGCGTCCGGCGGCACCGGTCGCCGAAACCCTGGCAGCGGCCGGCATCGTCGGCGGACTGCCGCTCGGACCGTTCCGCCCGCAGCTTGGCAACTGCCTGCTGGTGTGCGCAACGGAGAAGCGAACGGATCCGGAGATCGCTGCCTTCCGCGAGGCGCTTGCGGCGGCGCTGGCGCGATGAACGACCGCGCACGCTTTGACGTGGACGCAAGGACTATCTTCGATCTCGGTGCGCCCGGGCGGACAGCGGCGGCGCAGTTGCCGCCATCTGCAGGTGACGCGCCATCCCAGGATGACGCGCCATCCCAGGATGGCGTGGGCGATTTGCCAGCAGAGTGCCTGCGCTCCGACAGGCCGATGCTGCCGGAAGTGTCGGAGCTCCAAGCAGTGCGCCACTACACGAATCTGTCGCGCCGGAACTTCTCCATCGACAACCAGTTCTATCCGCTTGGCTCGTGTACCATGAAGTACAACCCGCGCGGTACACACCGGGCCGCCAGCCTGACCGGATTCGCGGAACGCCATCCGCTGGCCCCGGAAGGCGTCAGTCAAGGGTTTCTGTCCTGCCTGTTCGAGCTTCAAGAGACATTGAAGACGGTCACCGGCATGCCGGCCGTGTCGCTGACGCCCATGGCCGGCGCCCAAGGCGAGTTCGCGGGCGTGGCCATGATCCGCGCCTACCACGACGCGCGCGGCGATCACGGGCGGCGCGAAGTCCTGGTGCCCGCGGCCGCCCACGGCACCAACCCGGCCACGGCGGTCATGTGCGGCTATCGTGCGCGCGAGGTGGCGGTCGGTGCCGACGGCGATGTCGACGTCGACGAGTTGAAGGCGGCGGTGGGGCCTGAAACCGCCGGCATCATGCTCACCAACCCCTCGACCTGCGGCGTGTTCGAACGACGGATCCGCGACATCGCGGACATCGTACACAACGCCGGCGGCCTCCTGTACTACGATGGCGCCAACCTGAACGCCATCCTCGGCAGGGCGCGGCCCGGCGACATGGGGTTCGACGTGGCGCACCTGAACCTGCACAAGACGTTCGCGACGCCGCACGGCGGCGGCGGCCCCGGTGCCGGTCCGGTGGCGGCCGGCGAACGCTTGAGAGCGTTTCTGCCGACCCCCTATGTGGTGTGCGAAACCGATGCCGGCGGCGCGAAGCGATACCGCTGGACCCGCGCCGGGGATTGCCCGCAGAGCATCGGCCGGCTGTCGGCGTTCATGGGCAACGCGGGCATCCTGCTGCGCGCGCTGGCTTACGCGCAAATGCTCGGCCGCGAGGGCTTCCGGCGCGTTGGCAACTACGCGACGTTGAACGCCAACTACCTGATGGCGCAGCTACGGGATGCCGGTTTCGAGCTGGCGTATCCGACGCGGCGCGCCAGCCACGAGTTCATCGTCACGTTCGGGAAGGAAGCCAAGACCTGGGGCGTCACCGCCATGGACATCGCCAAGCGCCTGCTCGACTACGGCTGCCATGCGCCGACGACCTACTTTCCGCTGCTCGTGCCCGAGTGCTTTCTGATCGAGCCGACGGAAACCGAGGCGCCGGAGGAACTCGACGCCTTCGTGGACGCCTTGGTCCGCATCCGCAACGAAGCCGAGCGCGAACCCGCCCTGGTGAAGACGGCACCGCACACGCTGCCCGTCGCACGCTTGGACGACGTCAAGGCGGCGCGGGAACTGAATCTGACAGATCGTCGCACCGATTCGCAATAG

Transcript

ANN25982-RA

Protein

Uniprot

Uniprot term	Description
Q3SMC1	Probable glycine dehydrogenase (decarboxylating) subunit 2 OS=Thiobacillus denitrificans (strain ATCC 25259 / T1) OX=292415 GN=gcvPB PE=3 SV=1
A5I9T3	Probable glycine dehydrogenase (decarboxylating) subunit 2 OS=Legionella pneumophila (strain Corby) OX=400673 GN=gcvPB PE=3 SV=1
Q5X0A8	Probable glycine dehydrogenase (decarboxylating) subunit 2 OS=Legionella pneumophila (strain Lens) OX=297245 GN=gcvPB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02347	GDC-P	Glycine cleavage system P-protein	Domain	Interproscan
PF21478	GcvP2_C	Glycine dehydrogenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049315	Domain	Glycine cleavage system P-protein, N-terminal domain	Interproscan
IPR049316	Domain	Glycine dehydrogenase, C-terminal domain	Interproscan
IPR020581	Family	Glycine cleavage system P protein	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR023012	Family	Probable glycine dehydrogenase (decarboxylating) subunit 2	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11773	GLYCINE DEHYDROGENASE, DECARBOXYLATING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004375	Molecular Function	glycine dehydrogenase (decarboxylating) activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005960	Cellular Component	glycine cleavage complex	Interproscan
GO:0006546	Biological Process	glycine catabolic process	Interproscan
GO:0016594	Molecular Function	glycine binding	Interproscan
GO:0019464	Biological Process	glycine decarboxylation via glycine cleavage system	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00283	gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2	EC:1.4.4.2	Lipoic acid metabolism	ko00785	deepkoala