Gene detail

Detailed information of ANN25989-RA in Montipora grisea

Genomic Location: Scaffold_140__1_contigs__length_196562:55166...55600
NR annotation: MCE2423762.1, 50S ribosomal protein L11 [Pseudomonadales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B8GV69	Large ribosomal subunit protein uL11 OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=rplK PE=3 SV=1
Q2S901	Large ribosomal subunit protein uL11 OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=rplK PE=3 SV=1
Q60A10	Large ribosomal subunit protein uL11 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=rplK PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00298	Ribosomal_L11	Ribosomal protein L11, RNA binding domain	Domain	Interproscan
PF03946	Ribosomal_L11_N	Ribosomal protein L11, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020783	Domain	Large ribosomal subunit protein uL11, C-terminal	Interproscan
IPR000911	Family	Ribosomal protein uL11	Interproscan
IPR036769	Homologous_superfamily	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Interproscan
IPR036796	Homologous_superfamily	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Interproscan
IPR006519	Family	Large ribosomal subunit protein uL11, bacterial-type	Interproscan
IPR020784	Domain	Large ribosomal subunit protein uL11, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11661	60S RIBOSOMAL PROTEIN L12	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0015934	Cellular Component	large ribosomal subunit	Interproscan
GO:0070180	Molecular Function	large ribosomal subunit rRNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02867	RP-L11, MRPL11, rplK; large subunit ribosomal protein L11	-	Ribosome	ko03011	deepkoala