Detailed information of ANN26008-RA in Nanomia septata

Genomic Location: NSv0.8_hap2_scaf211:5994702...5998616
NR annotation: XP_052675387.1, uncharacterized protein LOC128157070 [Crassostrea angulata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q07135Histone H2A, orphon OS=Chironomus thummi thummi OX=7155 PE=3 SV=2
P02269Histone H2A OS=Asterias rubens OX=7604 PE=1 SV=2
P19178Histone H2A OS=Platynereis dumerilii OX=6359 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00538Linker_histonelinker histone H1 and H5 familyDomainInterproscan
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002119FamilyHistone H2AInterproscan
IPR005818DomainLinker histone H1/H5, domain H15Interproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR032458Conserved_siteHistone H2A conserved siteInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR032454DomainHistone H2A, C-terminal domainInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23430HISTONE H2AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11251H2A; histone H2A-Exosomeko04147deepkoala

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