Gene detail

Detailed information of ANN26181-RA in Montipora grisea

Genomic Location: Scaffold_551__1_contigs__length_86882:70508...71131
NR annotation: NNE53422.1, polyribonucleotide nucleotidyltransferase [Sulfitobacter sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q1GKK5	Polyribonucleotide nucleotidyltransferase OS=Ruegeria sp. (strain TM1040) OX=292414 GN=pnp PE=3 SV=1
Q16CF6	Polyribonucleotide nucleotidyltransferase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) OX=375451 GN=pnp PE=3 SV=1
Q5LN23	Polyribonucleotide nucleotidyltransferase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=pnp PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01138	RNase_PH	3' exoribonuclease family, domain 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012162	Family	Polyribonucleotide nucleotidyltransferase	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR001247	Domain	Exoribonuclease, phosphorolytic domain 1	Interproscan
IPR027408	Homologous_superfamily	PNPase/RNase PH domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11252	POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004654	Molecular Function	polyribonucleotide nucleotidyltransferase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006401	Biological Process	RNA catabolic process	Interproscan
GO:0006402	Biological Process	mRNA catabolic process	Interproscan