Gene detail

Detailed information of ANN26225-RA in Nanomia septata

Genomic Location: NSv0.8_hap2_scaf128:5208...6703
NR annotation: NQZ66195.1, DEAD/DEAH box helicase [Mycoplasmatales bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q49Z29	DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=cshA PE=3 SV=1
Q5HME0	DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A) OX=176279 GN=cshA PE=3 SV=1
Q8CRP6	DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=cshA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050547	Family	DEAD box ATP-dependent RNA helicases	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47963	DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0009409	Biological Process	response to cold	Interproscan
GO:0033592	Molecular Function	RNA strand annealing activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05592	deaD, cshA; ATP-dependent RNA helicase DeaD	EC:5.6.2.7	Ribosome biogenesis	ko03009	deepkoala