Gene detail

Detailed information of ANN26226-RA in Montipora grisea

Genomic Location: Scaffold_1401__1_contigs__length_55681:4958...17686
NR annotation: XP_019849875.1, PREDICTED: rho GTPase-activating protein 24-like [Amphimedon queenslandica]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN26226-RA

ATGTATGACAGCTTGTACCCTTCAGTCAGCACCAGAGTACAAGAACAGATTGCTTCTCTGCTGTGTAGTACAAGTAACAAAATTGCACTCAAACACATAAATGTACAAAAGCAGTGTGGGAATTGTGACTGTGGACTTTTTGCGATTGTCTATGCAACTGCGATAGTCTATGGGATTTCTCCTGGACAATACCACTTTGACCAGAGCAAGATGAGAAGGCATCTATATGAGTGTTTGCAGCAGGGAAAGGTGACCATGTTTCCATGGACGAAGAAAGAAGAGGCACAAAGAAATGCATATCTGAAGACTGTATTAGCTCATATTGCACTTGTAGGATGCCAGAGTTGCCAGCAGTACAAATGGAGAAGACACAGCAACGGAAGTGTGATTGCAGGAACAGCCCTTCTACCAGTTGTCTGTGCGTTACAACCTGGCAGTCTGGGAACGAGACGGGCATGGCTTGGCTTCCAGAAGAATCATGTTAGACCCGTCCAATGTGTTGAAGCTAAACTTCAGGTTCGTAAGACAGGATGGCTAAGCAAGCGTGGTGGGAGGATCCATACCTGGCACAGACGTTGGTTTGCGCTCACAGGGGATATGCTCTTCTACTACAAAACACCTCAGGACTCTAGACCGACTGGCACCATTCCTCTGGCTGGGAATAGGGTGGTGAGGCATCCAGATGATCCCAAGCAGCAAGGCTCATTCAAGTTTGAGATTATGGCTGGTAGTGATCGGGAGGTAATCACCAGTAACCATGACACGTACCTCATTAGTGCTGACTCAGCAGAGGATGCTAACGCCTGGACAGCTGCTATTAGGAGAGTGATGCACGAGCCATACGGAGGAGGGATGTTTGGCCGTAGTTTGGAAGAAACGATGAAGGTGGAGGGAAGGTTGGGAGGGACCTACATTCCAGTCCTCATCCATCGCTGCGTCAAGTTCCTCAAAGACAATGCAGGGCATCAGCTAGACTTCAGAGCAGGCGAGGACGTTCACACTGTTGCTTCCCTCCTGAAGTTGTACCTCAGAGAGCTGCCAGAACCGGTTGTGCCCTACGCATACTACCAAAGCTTCCAGAAAGTCATTACATTGCATGAGAATAACCAATCAGAGGCCATAGATGGTCTTAAACGCCTCATGATTCAGATTCCCAAGTCAAACTTCAACGTGCTCAAATACATGATTCGGTTTTTACACGAGGTGCAGGAGTACTCGAGCTCCAACAAGATGACTCCTTTGAATCTTGGGACCATCTTTGGACCACACCTACTCAGACCAAAGACCGATGACCCCCAGGTGTTGATGGAGTGTAACAATCTCTCTGCTCAGTTTGTCTGTATTCTAATCCAGAACAACGATGTGTTCTTCCCGGTCACTGATGACGAGAGACCACCCAACAGATTGAGTCTTGCTGCCTCTCCAGATGAACCTCCTCTTGTTTGGCACGAGAGTAAGCTCACTAGCCAATCTCTCTACAACCCAAAACCCCCAGAGACGTCTTTGGAGCCAAGAAGAAGGCCTCGACAAAACACAGCCCCAACCAATGCCCTTGACAACAAGAGCAAAGGCAAGTTTGTCCCAGGCAAGGTCTTGTCGATGGTAGAGCAGTTTAACATGAGATCTTCACGTAGTGCCTCCTTCATTTCCACTCCCGCACACACTACAAGTGGAAATCACGTCATCTCTGACCCAATCTTTCAACCAGGGAGCAGCTCGACCCTCCCAAAATCTGTTACTAGACAACTGGAGCAGGATGCGGCAAAGGTCAGGAGAAAGAACAGTTTGCCTATGGAGTTTCCTGAGGAGTCACCTCCTCCAATTGTTGAAAATGGGCTTCACAAACGTGAGAATTTATCACCACCTTACATACCTCCTCCTTCGCTGAATGGGATAGCAGAAGGGGAAGCGAGTGACGAAGGTGAGAGCGATGAGGACGTACCAGAAATGCTCAAGAGATTCTCGGGAGAGTTAGACCAATACGAGAAGCAGTTGGCTTTTGCACGGGAGGAAATGGTGAAGTTCAAGAAGGCTGCACGGCTCTGGAAGTCAAGATATGAACAGGAAAGAAGAGCAAGATTAGCAGCAGAGACTCAAATCAGAGATCTTCAAGTGTTGATTGATGACACATTCAAGCAGTTTGCACTAGACGATAGCGAAGATGACCTTGAAGATGATTCTAACGAAGCCAGCAGTATTTCCGTCTCACCGGACTTTACTGTGCCCAAACGGGTCCCTAGCTTGAGAGGTGGGGTGGGTGGAACTCTGCCGTCTGTACACTCCATTGTCTGA

Transcript

ANN26226-RA

Protein

Uniprot

Uniprot term	Description
Q5U2Z7	Rho GTPase-activating protein 24 OS=Rattus norvegicus OX=10116 GN=Arhgap24 PE=1 SV=2
Q8C4V1	Rho GTPase-activating protein 24 OS=Mus musculus OX=10090 GN=Arhgap24 PE=1 SV=2
Q8N264	Rho GTPase-activating protein 24 OS=Homo sapiens OX=9606 GN=ARHGAP24 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620	RhoGAP	RhoGAP domain	Domain	Interproscan
PF00169	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR000198	Domain	Rho GTPase-activating protein domain	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR051025	Family	Rho GTPase-activating	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15228	SPERMATHECAL PHYSIOLOGY VARIANT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0090630	Biological Process	activation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20642	ARHGAP22_24_25; Rho GTPase-activating protein 22/24/25	-	Membrane trafficking	ko04131	deepkoala