Detailed information of ANN26279-RA in Montipora grisea

Genomic Location: Scaffold_119__1_contigs__length_221441:150851...152409
NR annotation: GMG81490.1, sigma-54 dependent transcriptional regulator [Limibaculum sp. NKW23]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P31908Hydrogenase transcriptional regulatory protein HoxA OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=hoxA PE=3 SV=2
P29267Hydrogenase transcriptional regulatory protein HoxA OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=hoxA PE=3 SV=2
Q9APD9Transcriptional regulatory protein ZraR OS=Klebsiella oxytoca OX=571 GN=zraR PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00158Sigma54_activatSigma-54 interaction domainDomainInterproscan
PF02954HTH_8Bacterial regulatory protein, Fis familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025943Binding_siteSigma-54 interaction domain, ATP-binding site 2Interproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan
IPR002078DomainRNA polymerase sigma factor 54 interaction domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR002197DomainDNA binding HTH domain, Fis-typeInterproscan
IPR025944Conserved_siteSigma-54 interaction domain, conserved siteInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32071TRANSCRIPTIONAL REGULATORY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

TOP