Gene detail

Detailed information of ANN26282-RA in Montipora grisea

Genomic Location: Scaffold_119__1_contigs__length_221441:191861...193858
NR annotation: WP_173201410.1, acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [Geobacter sp. SVR]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN26282-RA

ATGTTCGACAGCCTGCTGATCGCCAACCGAGGCGAAATCGCTTGCCGGGTGATGAAAACGGCCCGGCGGCTCGGCCTGCGCTGCATCGCCGTCTATTCCGACGCCGATGCCGATGCCCGGCATGTGGCGCTCGCGGACGAGGCGATTCGGATCGGTCCGCCGGCGGCGCGCGATAGCTACCTGAAGATCGAGGCGATCCTCGAGGCGGCGCGCAGCAGCGGCGCAGCGGCGATTCATCCCGGCTACGGGTTCCTGTCCGAAAGCGCGGCCTTTGCCGAAGCGGTGACGGCGGCCGGACTGGTCTGGGTCGGCCCGCCGGCCAGCGCCATCGAGGCCATGGGATCCAAGAGCGCGGCCAAGGCCATCATGGGCGAGGCCGGCGTGCCCCTGGTGCCGGGCTACCACGGTGAGGCTCAGGACGAACGGACTCTGGCGGCGGCTGCGGCCGAGATTGGTTACCCGCTCCTGGTCAAGGCCTCGGCTGGCGGTGGCGGCAAGGGCATGCGGGTGGTCGAGCGCGCCGAGGATCTGACGGCGGCCCTGGATGGCGCGAAGCGTGAGGCCGCGGCCTCCTTCGGCGACGACCGGGTCTTGCTGGAGAAGTACCTTACGCAGCCGCGCCACGTGGAACTCCAGGTTTTCGCCGACAGCCACGGGAATGCCGTGCACCTGTTCGAGCGCGATTGCTCGATCCAACGCCGGCACCAGAAGGTCCTGGAAGAAGCCCCCGCACCGGGCATGACGGAAGAGCTCAGGGCGCGTATGGGCGCGGCGGCGGTTGAGGCTGCCAAGGCCATCGGCTACGTCGGGGCCGGAACCGTGGAGTTCCTGCTCGACGGCCTGGACTTCTACTTCATGGAAATGAACACGCGGCTGCAGGTCGAGCATCCGGTCACCGAGATGGTTACCGGTCAGGACCTGGTCGAGTGGCAGCTCCGAGTCGCCGACGGCGCTGCGCTGCCGCTGACCCAGGACGAGCTGCGGATCGGCGGCCATTCCATCGAGGTTCGGCTCTATGCCGAGGATCCCGAGCGAGACTTCCTGCCGTCGACCGGCGACCTGGTTCACCTGCAGTTCCCCGAGGAGGACGAGCGCCTTCGCGTGGAGACCGGGGTGCGGCAGGGCGATAGCGTCAGCCTCCACTACGACCCGATGATCGCCAAGCTGGTGGTCTGGGACGAGGACCGGTCCGCGGCGGTGCGGCGCTTGCGCCGCGTTCTGACGGCGACCCAGGTGGTGGGGCCGCAGACCAATCTGCCGTTTCTGCGGTCGCTGGCGGCGAACTCCAGTTTCGGCGCGGCGGACTTGGATACGGGTTTCATCGAGCGGCATCGGGCGGCCTTGCTTCCGCAGCGGCAGCCAGCAGGCAGCGCGGTGCTGGCCCTGGTGTCGCTGGCCGAGATCCTGCATCGCAAGCGCGAGGCGGAAGCGCGGGCCCGGCAATCGCCGGACCCCTATTCGCCCTGGCATATGAGCAACGGCTGGCGGCTCAACAGCGGAACCCACAGCCGTCTCGTCTTCCTCGAAGACGATCGTGAGACCGAGGTCGAGCTCTACTTCGAAGCGGCCGACTATCGGATCGAGGTGGCCGGGCAGTCGCATCGGGTGCGCGGCACCTTGGATGCCGACGGTGGGTTGGACGCGGAAGTCGACGGCGAACGCCTGCGGGCCACCGTGGTGCGGCGTGGCCATGACATCTCGTTGCTGACCGCCGATGCGAGCCATGGCCTTCGTCTGCAAGACCCGCTCGACCTGGGCCGCGACCAGGACGCGGCGGGCGGCCGGCTCACCGCGCCCATGCCGGGCCGCCTGATTCGGGTGATGACCGAGGCGGGCGCCGAGGTCACCCGCGGCACGCCTCTCCTCGTCCTGGAGGCGATGAAGATGGAGCACACGATCGGGGCGCCGGCGGACGGAGTCGTGGCCGAGCTGTACTTCCGTGAGGGCGACCTGGTGGAAGAGGGCGTCGACCTGCTCGATTTCGAGCCGACGTCATGA

Transcript

ANN26282-RA

Protein

Uniprot

Uniprot term	Description
Q54KE6	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=mccA PE=3 SV=1
Q96RQ3	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Homo sapiens OX=9606 GN=MCCC1 PE=1 SV=3
Q99MR8	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00289	Biotin_carb_N	Biotin carboxylase, N-terminal domain	Domain	Interproscan
PF02785	Biotin_carb_C	Biotin carboxylase C-terminal domain	Domain	Interproscan
PF00364	Biotin_lipoyl	Biotin-requiring enzyme	Domain	Interproscan
PF02786	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005481	Domain	Biotin carboxylase-like, N-terminal domain	Interproscan
IPR005479	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR011054	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR005482	Domain	Biotin carboxylase, C-terminal	Interproscan
IPR000089	Domain	Biotin/lipoyl attachment	Interproscan
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR011764	Domain	Biotin carboxylation domain	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR011053	Homologous_superfamily	Single hybrid motif	Interproscan
IPR016185	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR001882	Binding_site	Biotin-binding site	Interproscan
IPR050856	Family	Biotin-dependent Carboxylase Complex	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18866	CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01968	MCCC1, accA1; 3-methylcrotonyl-CoA carboxylase alpha subunit	EC:6.4.1.4	Valine, leucine and isoleucine degradation	ko00280	deepkoala