Gene detail

Detailed information of ANN26294-RA in Montipora grisea

Genomic Location: Scaffold_178__1_contigs__length_163583:65090...67909
NR annotation: RKU17855.1, hypothetical protein C6500_14715 [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN26294-RA

ATGTTCAGACTCAGCACCACACTGCGTAACACTGTACGGGTAATTTTGGTTTTAGCGGTCCTGATTGTTGCCGCAGGGATTATCATCGACCGAGACACAAATGAGTTCACGTTACAGACTGCCGTCGGGCAGACGAACGATACACTTCAAACATCAGAAGATTTTCTGCACTTGGAACGCGCAAACCGAGCATTTATTGATTTGGTAGCGCGGACGCGTCCTGCTGTTGTCCAAATTACAACGACAACACAACGGAGTAGAATCACAACTTCGGAAAGACGAGAGATAACTCCGGAGCAAGAAGAGCAATTTAGAGACTTTTTTGGAGACGAGTTCTTCAGACGCTTTTTTCGAGAACCAGAACAAGAGCCGCGCCAACGTATATTCCCGAATCCGGTCCCCGTTCGCGGTGTTGGCTCTGGGGTGATCGTCAGTGACGATGGCTATATCCTTACCAATAATCATGTCATTGAAGGGAGCGATGAAATTACCGTTATCTTATCAAACGGAAAAGAATATGCAGCAGAGTTAGTTGGCCGCGATGCCGCTGGGACGCAAGTCAGTGGCACCGATTTGGCGGTTCTCAAAATTGATGCCGAAGAGCTCCCAGCCCTTCCATTCGGTGATTCAGATCAGCTTGAAGTTGGTGAATGGGTGATCGCCATCGGAACCCCACTCAATTTTTCGCAAACCGTGACACGAGGAATCGTGAGTGCGAAAGGGCGCCCTGGGGATCGCAGCGGTATTAAGTACGGTAACTTTATCCAAACGGATGCGCCGATCAATCGAGGGAACAGCGGTGGTGCTTTGATCAACATCCGCGGGGAATTGATTGGAATTAATACCGCGATTATTACCGGTGGTCTTTCCACAGGAAATATTGGTATCGGTTTCGCCGTCCCGAGTAAAATGGCACAACAGGTCTTACCGCAACTGATTAAGCACGGCAAGGTTGAGCGCGGTTGGCTCGGTATCAGCATGGGAAATGTCGATCAGGATTTGGCAGAAAAATTGCACTTTGATACACCGCGCGGTGCTTTTGTGCATGGCGTTAGCAAAGGGAGTCCCGCAGATAAAGGTGGACTCCAACGTTCAGATATCATCGTTGAATTTAATGACGAAACAATTCGAGATATCAATCATCTGATGCACGTTGTCGCAGCAACAGAGGTCGGTAAATCCGTTGAATTAACAGTGCTCCGAGGGGACAATGAAGAAAAACGGTTGACCGTCAAACTGGGCAAACGGACCGAAAGTGTTATTGCTAAACTCAATGCCCAGTTAGAAGAAGAAGCCGAAAAGGCTAGGACGAGAGTTGAAAGATTTGGAAAAGCGCGGCGAAACGGTGATGAACAGCAAGAAACGTTTGCTGGACTTCAGGTCCAAAATCTGACCGCCGAGATTGCTGAGCGTTACGGTTACTCCTCAGATGAGAAAGGTGTAGTCGTCACACAAGTTGAAAGCGGGAGCACTGCAGAGGAAAAAGGGATCGTCCCCGGATCTCTCATCCAGGAAATGGAGTGGACAACGATTGAGGACCTTGAGTCCTATGTCCGTCTTGTGGAACAACTCACAAACGAAAATAAAAGGCAAGTGCTCCTCTATGTTAAGTCGCCGAATGGACAGGGCGGCGCGTATGTGACAATAAAAGTACCGACATCAGAAGTCCCCACATCAGACAGGTTGGAAATGGAAGCACAACGGGTTGTTTGGCCCTATCGCGCTAAAGTTGACATTGAGACGTTTATGCTACCGCCCATCGGAGATGATGAAGTGCTTGTCGCAACGGAATGCACTCTCATCAGTCCCGGCACGGAGCGTGCGTTTTTATTGGGGCTCCCGAATGCCCAAGGAACGTATCCAACCCGCCCCGGTTACAGTAATATCGGCACAATAATAGAGGTTGGAAAGGCAGTCCCTGATTGGGAAGTCGGGGATCGCGTCGCTTCGACACAGGGACACACCAGCCACTTTGTGATGTCGCCGAGTCGCTTGCTAAAGATAGCGTCCGATGATGTTCCAGCCGAAGAGGCGGTTTTCTTTAATCTTGGAGCGATTGCGCTGCAAGGTGTCCGGAAAGCGCGGATTGAATTGGGAGAAGCGGCACTCATTTTGGGACAAGGACTTATCGGCTTATCGGCGATGCAACTCTCGAAACTGAGTGGTGCATTGCCCTTGATTGCTGCAGATCTCACCGACAGTCGTCTTGAAATCTCCAAAAGAGTGGGAGCAGACTACACCTTCAATCCAGAAGATACCGATTTCTCTGAACAGTTAAGTCATGCAACCAAAGGCGATGGACCAGCAGTTGTTATTGAGGCGACTGGACACCCTGACGCAATCAGCACGGCTTTAGATGTTGCGGGGCGCGATGCCCGAGTCGTGTTGTTGGCGAGTACGCGTGGGGAAACACCGAGCGTGAACTTCTATCGCGATGTGCATAAAAAAGGTCTCATTCTATATGGTGCCCATAATTCTATCCGCCCGCGTCAAGACTCTTCACCGAATTTCTGGACGCTTGAAGAGGATAGTCTCTTGTTGTTATCGCTCATCGCACAGAAGCGGTTCGACGTTATCCCCTTGATTAGTCATCGCGTCCCCGGAGAAGATGCAGCAAAAGCATATCAACTCCTCATGGAGTGGAATCCCGGCTTACTCGGTGTTGTTCTGCAGTGGAACAATAGCATGTAG

Transcript

ANN26294-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P18584	Probable periplasmic serine endoprotease DegP-like OS=Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx) OX=272561 GN=htrA PE=3 SV=2
Q9PL97	Probable periplasmic serine endoprotease DegP-like OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=htrA PE=3 SV=1
Q9Z6T0	Probable periplasmic serine endoprotease DegP-like OS=Chlamydia pneumoniae OX=83558 GN=htrA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0030858 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107 all species →	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF13180 all species →	PDZ_2	PDZ domain	Domain	Interproscan
PF13365 all species →	Trypsin_2	Trypsin-like peptidase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020843 all species →	Domain	Polyketide synthase, enoylreductase domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR011782 all species →	Family	Peptidase S1C, Do	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR013149 all species →	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR001940 all species →	Family	Peptidase S1C	Interproscan
IPR011032 all species →	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR009003 all species →	Homologous_superfamily	Peptidase S1, PA clan	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22939 all species →	SERINE PROTEASE FAMILY S1C HTRA-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0042597 all species →	Cellular Component	periplasmic space	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN26294-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.