Gene detail

Detailed information of ANN26327-RA in Montipora grisea

Genomic Location: Scaffold_52__1_contigs__length_458089:113150...114342
NR annotation: MCE2412709.1, T9SS type A sorting domain-containing protein [Candidatus Poribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00404	Dockerin_1	Dockerin type I domain	Domain	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036439	Homologous_superfamily	Dockerin domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR002105	Repeat	Dockerin type I repeat	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR016134	Domain	Dockerin domain	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22847	WD40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000272	Biological Process	polysaccharide catabolic process	Interproscan
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12880	THOC3; THO complex subunit 3	-	Spliceosome	ko03041	deepkoala