Detailed information of ANN26339-RA in Leptoseris scabra

Genomic Location: Scaffold_2__1_contigs__length_39127999:37801816...37803378
NR annotation: CAH3044570.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011548 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12937
all species →
F-box-likeF-box-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001810
all species →
DomainF-box domainInterproscan
IPR036047
all species →
Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR006553
all species →
RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16134
all species →
F-BOX/TPR REPEAT PROTEIN POF3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019005
all species →
Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146
all species →
Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN26339-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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