Gene detail

Detailed information of ANN26403-RA in Montipora grisea

Genomic Location: Scaffold_224__1_contigs__length_140491:69861...70947
NR annotation: RKU18256.1, carbamoyl phosphate synthase small subunit [Candidatus Poribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q3A450	Carbamoyl phosphate synthase small chain OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=carA PE=3 SV=1
B2URJ0	Carbamoyl phosphate synthase small chain OS=Akkermansia muciniphila (strain ATCC BAA-835 / DSM 22959 / JCM 33894 / BCRC 81048 / CCUG 64013 / CIP 107961 / Muc) OX=349741 GN=carA PE=3 SV=1
Q9RWI4	Carbamoyl phosphate synthase small chain OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) OX=243230 GN=carA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00117	GATase	Glutamine amidotransferase class-I	Domain	Interproscan
PF00988	CPSase_sm_chain	Carbamoyl-phosphate synthase small chain, CPSase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029062	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR002474	Domain	Carbamoyl-phosphate synthase small subunit, N-terminal domain	Interproscan
IPR017926	Domain	Glutamine amidotransferase	Interproscan
IPR036480	Homologous_superfamily	Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily	Interproscan
IPR035686	Domain	Carbamoyl-phosphate synthase small subunit, GATase1 domain	Interproscan
IPR006274	Family	Carbamoyl-phosphate synthase, small subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11405	CARBAMOYLTRANSFERASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004088	Molecular Function	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	Interproscan
GO:0006207	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0006541	Biological Process	glutamine metabolic process	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005951	Cellular Component	carbamoyl-phosphate synthase complex	Interproscan
GO:0006526	Biological Process	L-arginine biosynthetic process	Interproscan
GO:0006807	Biological Process	obsolete nitrogen compound metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01956	carA, CPA1; carbamoyl-phosphate synthase small subunit	EC:6.3.5.5	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala